Salmonella enterica subsp. enterica PartC-Senterica-RM8376 |
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Putative Salmonella enterica subsp. enterica PartC-Senterica-RM8376 RM systems
Ref: Tourlousse,D.M. et al. unpublished
REBASE ref # 34160
| Sequence length: | GenBank #: | |
| Chromosome: | 4,857,492 bp | CP064385 |
| plasmid unnamed: | 93,933 bp | CP064386 |
REBASE acronym: Sen700720
Org_num: 57576
All begin IUJ38_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 17040 | endoribonuclease SymE | |||
| 17045 | S | S.StyUK1II (100% identity) | GAGNNNNNNRTAYG | S.Sen700720ORF17050P |
| 17050 | M | M.StyLTIII (100% identity) | GAGNNNNNNRTAYG | M.Sen700720ORF17050P |
| 17055 | R | StyLT2IIP (100% identity) | GAGNNNNNNRTAYG | Sen700720ORF17050P |
| 17060 | restriction endonuclease | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 4195 | drug/metabolite exporter YedA | |||
| 4200 | V | V.StyUK1DcmP (100% identity) | CCWGG | V.Sen700720DcmP |
| 4205 | M | M.StyUK1Dcm (100% identity) | CCWGG | M.Sen700720DcmP |
| 4210 | phosphohydrolase | |||
| 11305 | DNA-binding transcriptional regulator Fis | |||
| 11310 | M | M.StyUK1III (100% identity) | ATGCAT | M.Sen700720ORF11310P |
| 11315 | DUF2556 family protein | |||
| 11800 | ribulose-phosphate 3-epimerase | |||
| 11805 | M | M.StyTDamP (100% identity) | GATC | M.Sen700720DamP |
| 11810 | cell division protein DamX | |||
| plasmid unnamed | ||||
| 23935 | 73 aa hypothetical protein | |||
| 23940 | M | M.StyUK1ORFAP (100% identity) | M.Sen700720ORF23940P | |
| 23945 | 118 aa hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 19235 | MFS transporter | |||
| 19240 | M | M.StyUK1I (100% identity) | CAGAG | M.Sen700720ORF19240P |
| 19245 | R | StyUK1IP (99% identity) | CAGAG | Sen700720ORF19240P |
| 19250 | 33 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 17055 | type I restriction-modification system | |||
| 17060 | R | StyUK1MrrP (100% identity) | Sen700720MrrP | |
| 17065 | BrnT family toxin | |||
| Orphan M | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 7995 | replication endonuclease | |||
| 8000 | M | M.StyLTORF13745P (100% identity) | GATC | M.Sen700720ORF8000P |
| 8005 | TraR/DksA family transcriptional regulator | |||