Escherichia coli O157:H7 PartA-EcoliO157H7-RM8376 |
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Putative Escherichia coli O157:H7 PartA-EcoliO157H7-RM8376 RM systems
Ref: Tourlousse,D.M. et al. unpublished
REBASE ref # 34160
| Sequence length: | GenBank #: | |
| Chromosome: | 5,564,632 bp | CP064383 |
| plasmid unnamed: | 92,060 bp | CP064384 |
REBASE acronym: Eco43895
Org_num: 57231
All begin IUJ36_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 25255 | endoribonuclease SymE | |||
| 25260 | S | S.EcosPA8ORF17615P (100% identity) | CACNNNNNNNCTGG | S.Eco43895ORF25265P |
| 25265 | M | M.EcosPA8ORF17615P (100% identity) | CACNNNNNNNCTGG | M.Eco43895ORF25265P |
| 25270 | R | Ecos1613ORF27060P (100% identity) | CACNNNNNNNCTGG | Eco43895ORF25265P |
| 25275 | DUF262 domain-containing protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 7555 | TrmB family transcriptional regulator | |||
| 7560 | M | M.EcosPA8ORF27255P (100% identity) | M.Eco43895ORF7560P | |
| 7575 | DUF1737 domain-containing protein | |||
| 9085 | DUF1367 family protein | |||
| 9090 | R | Ecos15739ORF2910P (100% identity) | Eco43895ORF9100P | |
| 9095 | 329 aa hypothetical protein | |||
| 9100 | M | M.Ecos15739ORF2910P (100% identity) | M.Eco43895ORF9100P | |
| 9105 | 81 aa hypothetical protein | |||
| 13540 | NinE family protein | |||
| 13545 | M | M.Eph2851ORFAP (100% identity) | GATC | M.Eco43895ORF13545P |
| 13550 | recombination protein NinB | |||
| 19425 | DNA-binding transcriptional regulator Fis | |||
| 19430 | M | M.EcosPA8ORF11510P (100% identity) | ATGCAT | M.Eco43895ORF19430P |
| 19435 | DUF2556 family protein | |||
| 19945 | ribulose-phosphate 3-epimerase | |||
| 19950 | M | M.UbaC1152DamP (100% identity) | GATC | M.Eco43895DamP |
| 19955 | cell division protein DamX | |||
| 24995 | transposase | |||
| 25000 | R | Ecos1613ORF26795P (100% identity) | Eco43895ORF25000P | |
| 25005 | N-acetylneuraminic acid mutarotase | |||
| 25035 | DEAD/DEAH box helicase | |||
| 25040 | RM | EcosPA8ORF17390P (100% identity) | GAAABCC | Eco43895ORF25040P |
| plasmid unnamed | ||||
| 27705 | 101 aa hypothetical protein | |||
| 27710 | M | M.EcosPA8ORF27775P (100% identity) | M.Eco43895ORF27710P | |
| 27715 | 73 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 25240 | DUF1127 domain-containing protein | |||
| 25245 | R | Ecos1613GmrSP (100% identity) | Eco43895GmrSP | |
| 25250 | R | EcosPA8GmrSDP (55% identity) | Eco43895GmrDP | |
| 25255 | endoribonuclease SymE | |||
| Orphan M | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 4550 | recombination protein NinB | |||
| 4555 | M | M.SflN97ORF8425P (100% identity) | GATC | M.Eco43895ORF4555P |
| 4560 | NinE family protein | |||