|
Putative Weissella cibaria JW15 RM systems
Ref: Ahn,S.-B. et al. J Biomed Res 14 (4), 206-211 (2013)
REBASE ref # 34209
Sequence length: | GenBank #: | |
Chromosome: | 2,472,214 bp | CP058237 |
plasmid pCBA3612-03: | 14,411 bp | CP058240 |
REBASE acronym: WciJW15
Org_num: 57169
All begin HUW87_
Type I | ||||
---|---|---|---|---|
ORF | Gene | Most similar | Specificity | Name |
plasmid pCBA3612-03 | ||||
12170 | HTH domain-containing protein | |||
12175 | R | Wco830ORF10P (97% identity) | WciJW15ORF12180P | |
12180 | M | M.Lsa22ORF10530P (97% identity) | M.WciJW15ORF12180P | |
12185 | S | S.Lsa20ORF3220P (42% identity) | S.WciJW15ORF12180P | |
12190 | DNA-binding protein | |||
Type II | ||||
ORF | Gene | Most similar | Specificity | Name |
Chromosome | ||||
3270 | 174 aa hypothetical protein | |||
3275 | M | M1.WciM2ORF523P (78% identity) | M1.WciJW15ORF3275P | |
3280 | M | M2.WciM2ORF523P (89% identity) | M2.WciJW15ORF3275P | |
3285 | R | WciM2ORF523P (81% identity) | WciJW15ORF3275P | |
3290 | transposase | |||
Type IV | ||||
ORF | Gene | Most similar | Specificity | Name |
Chromosome | ||||
10045 | 160 aa hypothetical protein | |||
10050 | R | Wci3636ORF9840P (100% identity) | WciJW15ORF10050P | |
10055 | transposase |