Klebsiella pneumoniae SP968 |
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Putative Klebsiella pneumoniae SP968 RM systems
Ref: Veeraraghavan,B. et al. unpublished
REBASE ref # 34245
| Sequence length: | GenBank #: | |
| Chromosome: | 5,359,590 bp | CP069203 |
| plasmid pSP968_1: | 127,934 bp | CP069204 |
| plasmid pSP968_2: | 54,404 bp | CP069205 |
| plasmid pSP968_3: | 40,155 bp | CP069206 |
REBASE acronym: Kpn968
Org_num: 57428
All begin IEE96_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 9120 | Na+/H+ antiporter | |||
| 9125 | M | M.Kpnst65ORF25810P (100% identity) | AGCNNNNNCTTC | M.Kpn968ORF9125P |
| 9130 | S | S.Sen64034II (100% identity) | AGCNNNNNCTTC | S.Kpn968ORF9125P |
| 9135 | restriction system-associated AAA family ATPase | |||
| 22620 | 322 aa hypothetical protein | |||
| 22625 | R | Ksp4251ORF21690P (100% identity) | GAAYNNNNNNNCTGG | Kpn968ORF22630P |
| 22630 | M | M.Ksp4251ORF21690P (100% identity) | GAAYNNNNNNNCTGG | M.Kpn968ORF22630P |
| 22635 | S | S.Kpnst65ORF21505P (100% identity) | GAAYNNNNNNNCTGG | S.Kpn968ORF22630P |
| 22640 | endoribonuclease SymE | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1815 | cell division protein DamX | |||
| 1820 | M | M.KspC31DamP (100% identity) | GATC | M.Kpn968DamP |
| 1825 | ribulose-phosphate 3-epimerase | |||
| 6405 | recombination protein NinG | |||
| 6410 | M | M2.Kpnst65ORF18060P (100% identity) | GATC | M1.Kpn968ORF6410P |
| 6415 | antitermination protein | |||
| 6420 | TrmB family transcriptional regulator | |||
| 6425 | M | M1.Kpnst65ORF18060P (100% identity) | M2.Kpn968ORF6410P | |
| 6430 | phage holin, lambda family | |||
| 9575 | conserved phage C-terminal domain-containing | |||
| 9580 | M | M.Kpnst65ORF24645P (100% identity) | GATC | M.Kpn968ORF9580P |
| 9585 | RusA family crossover junction | |||
| 9775 | phosphohydrolase | |||
| 9780 | M | M.Kpntgc02DcmP (100% identity) | CCWGG | M.Kpn968DcmP |
| 9785 | V | V.Ksp2N3ORFEP (75% identity) | CCWGG | V.Kpn968DcmP |
| 9790 | drug/metabolite exporter YedA | |||
| 22850 | HNH endonuclease | |||
| 22855 | R | Ksp4251ORF21915P (100% identity) | Kpn968ORF22855P | |
| 22860 | type VI secretion system tube protein Hcp | |||
| plasmid pSP968_1 | ||||
| 26255 | EAL domain-containing protein | |||
| 26260 | R | YpsR1ORFAP (100% identity) | CCWGG | Kpn968ORF26265P |
| 26265 | M | M.YpsR2ORFAP (99% identity) | CCWGG | M.Kpn968ORF26265P |
| 26270 | IS1 family transposase | |||
| plasmid pSP968_2 | ||||
| 26860 | 103 aa hypothetical protein | |||
| 26865 | M | M.Kpnst65ORF12385P (100% identity) | M.Kpn968ORF26865P | |
| 26870 | 75 aa hypothetical protein | |||
| plasmid pSP968_3 | ||||
| 27110 | 137 aa hypothetical protein | |||
| 27115 | M | M.Kqu268ORF27235P (99% identity) | M.Kpn968ORF27115P | |
| 27120 | 140 aa hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| plasmid pSP968_3 | ||||
| 27055 | 122 aa hypothetical protein | |||
| 27060 | R | Kqu268ORF27185P (99% identity) | AGACC | Kpn968ORF27065P |
| 27065 | M | M.Kpn8883II (99% identity) | AGACC | M.Kpn968ORF27065P |
| 27070 | 94 aa hypothetical protein | |||