Citrobacter koseri TUM13189 |
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Putative Citrobacter koseri TUM13189 RM systems
Ref: Tsutsumi,Y. et al. unpublished
REBASE ref # 34065
| Sequence length: | GenBank #: | |
| Chromosome: | 4,804,009 bp | AP025640 |
| plasmid pMTY13189_IncHI2: | 255,859 bp | AP025641 |
| plasmid pMTY13189_untypable1: | 21,632 bp | AP025642 |
REBASE acronym: Cko13189
Org_num: 56740
All begin TUM13189_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 37450 | 118 aa hypothetical protein | |||
| 37460 | R | CkoK820ORF21895P (100% identity) | CGANNNNNNNNRTGAC | Cko13189ORF37470P |
| 37470 | M | M.Cko20903ORF37260P (100% identity) | CGANNNNNNNNRTGAC | M.Cko13189ORF37470P |
| 37480 | S | S.CkoK820ORF21895P (100% identity) | CGANNNNNNNNRTGAC | S.Cko13189ORF37470P |
| 37490 | endoribonuclease SymE | |||
| 37910 | metal-dependent hydrolase | |||
| 37920 | R | Cko20903ORF37740P (100% identity) | Cko13189ORF37950P | |
| 37930 | 2-hydroxyacid dehydrogenase | |||
| 37940 | S | S.Cko20903ORF37740P (100% identity) | S.Cko13189ORF37950P | |
| 37950 | M | M.Cko20903ORF37740P (100% identity) | M.Cko13189ORF37950P | |
| 37960 | 161 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 3000 | cell division protein DamX | |||
| 3010 | M | M.Csp5362DamP (100% identity) | GATC | M.Cko13189DamP |
| 3020 | ribulose-phosphate 3-epimerase | |||
| 4100 | 54 aa hypothetical protein | |||
| 4110 | M | M.CkoK616ORF2200P (100% identity) | ATGCAT | M.Cko13189ORF4110P |
| 4120 | DNA-binding protein Fis | |||
| 13990 | DNA-binding response regulator | |||
| 14000 | M | M.CkoK616ORF7160P (100% identity) | M.Cko13189ORF14000P | |
| 14010 | 595 aa hypothetical protein | |||
| 16580 | phosphohydrolase | |||
| 16590 | M | M.Kpn5055ORF1936P (97% identity) | M.Cko13189ORF16590P | |
| 16600 | V | V.Kpn5055ORF1936P (100% identity) | V.Cko13189ORF16590P | |
| 16610 | drug/metabolite exporter YedA | |||
| 18070 | 156 aa hypothetical protein | |||
| 18080 | M | M.Cko20903ORF17860P (100% identity) | M.Cko13189ORF18080P | |
| 18090 | 244 aa hypothetical protein | |||
| 37880 | 256 aa hypothetical protein | |||
| ??? | R | Cko20903ORF37680P (100% identity) | Cko13189ORF37890P | |
| 37900 | 209 aa hypothetical protein | |||
| 39360 | 118 aa hypothetical protein | |||
| 39370 | M | M.Cko20903ORF39160P (100% identity) | M.Cko13189ORF39370P | |
| 39380 | 190 aa hypothetical protein | |||
| plasmid pMTY13189_IncHI2 | ||||
| 46020 | nuclease | |||
| ??? | M | M.Ssp15303DcmP (100% identity) | CCWGG | M.Cko13189DcmP |
| 46050 | 55 aa hypothetical protein | |||
| 47460 | 106 aa hypothetical protein | |||
| 47470 | M | M.Ssp15303ORFDP (100% identity) | M.Cko13189ORF47470P | |
| 47480 | 202 aa hypothetical protein | |||
| 47760 | DNA-binding protein | |||
| 47770 | M | M.Ssp15303ORFEP (84% identity) | M.Cko13189ORF47770P | |
| 47780 | 85 aa hypothetical protein | |||
| plasmid pMTY13189_untypable1 | ||||
| 47920 | 151 aa hypothetical protein | |||
| 47930 | M | M.EhoEh60ORF24525P (100% identity) | M.Cko13189ORF47930P | |
| 47940 | 140 aa hypothetical protein | |||