Escherichia albertii RM9976 |
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Putative Escherichia albertii RM9976 RM systems
Ref: Carter,M.Q. et al. unpublished
REBASE ref # 29334
| Sequence length: | GenBank #: | |
| Chromosome: | 4,976,140 bp | CP043262 |
| plasmid p1RM9976: | 200,522 bp | CP043265 |
| plasmid p2RM9976: | 85,807 bp | CP043264 |
| plasmid p3RM9976: | 84,014 bp | CP043263 |
REBASE acronym: Eal9976
Org_num: 56778
All begin FYK19_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 24180 | DEAD/DEAH box helicase | |||
| 24185 | S | S.EalTBGAORF20240P (99% identity) | S.Eal9976ORF24190P | |
| 24190 | M | M.EalTBGAORF20240P (100% identity) | M.Eal9976ORF24190P | |
| 24195 | R | EalTBGAORF20240P (100% identity) | Eal9976ORF24190P | |
| 24200 | WYL domain-containing protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1500 | recombination protein NinB | |||
| 1505 | M | M.SflN97ORF15810P (100% identity) | GATC | M.Eal9976ORF1505P |
| 1510 | NinE family protein | |||
| 5510 | 118 aa hypothetical protein | |||
| 5515 | M | M.Sso8376ORF9905P (99% identity) | CTGCAG | M.Eal9976ORF5515P |
| 5520 | R | SsoST152ORF13040P (99% identity) | CTGCAG | Eal9976ORF5515P |
| 5525 | type II toxin-antitoxin system RelE/ParE family | |||
| 8475 | recombination protein NinB | |||
| ??? | M | M.EcoSTEC416ORF20240P (100% identity) | GATC | M.Eal9976ORF8480P |
| 8490 | 61 aa hypothetical protein | |||
| 9320 | phosphohydrolase | |||
| 9325 | M | M.EalEA1DcmP (100% identity) | CCWGG | M.Eal9976DcmP |
| 9330 | V | V.Eal6S651DcmP (100% identity) | V.Eal9976DcmP | |
| 9335 | drug/metabolite exporter YedA | |||
| 10565 | integration host factor subunit alpha | |||
| 10570 | M | M.Eal40ORF11195P (100% identity) | M.Eal9976ORF10570P | |
| 10575 | Com family DNA-binding transcriptional | |||
| 13785 | LexA family transcriptional regulator | |||
| 13790 | M | M.Sso7924ORF2966P (99% identity) | GATC | M.Eal9976ORF13790P |
| 13795 | PerC family transcriptional regulator | |||
| 18455 | DNA-binding transcriptional regulator Fis | |||
| 18460 | M | M.Eco4356ORFEP (100% identity) | M.Eal9976ORF18460P | |
| 18465 | DUF2556 domain-containing protein | |||
| 18975 | ribulose-phosphate 3-epimerase | |||
| 18980 | M | M.Eco4356DamP (100% identity) | GATC | M.Eal9976DamP |
| 18985 | cell division protein DamX | |||
| 22695 | PerC family transcriptional regulator | |||
| 22700 | M | M.Sso90ORF15820P (100% identity) | GATC | M.Eal9976ORF22700P |
| 22705 | LexA family transcriptional regulator | |||
| 22735 | 67 aa hypothetical protein | |||
| 22740 | M | M.Sso63633ORF22290P (100% identity) | M.Eal9976ORF22740P | |
| 22745 | phage lysis protein EssD | |||
| plasmid p1RM9976 | ||||
| 26955 | DUF1804 family protein | |||
| 26960 | M | M.EcoSTEC1080ORF13995P (98% identity) | M.Eal9976ORF26960P | |
| 26965 | phage terminase large subunit | |||
| plasmid p2RM9976 | ||||
| 25720 | 61 aa hypothetical protein | |||
| 25735 | M | M.EcoH8ORF24485P (99% identity) | M.Eal9976ORF25735P | |
| 25740 | recombination-associated protein RdgC | |||
| plasmid p3RM9976 | ||||
| 24905 | 73 aa hypothetical protein | |||
| 24910 | M | M.Sso8ORF23800P (100% identity) | SAY | M.Eal9976ORF24910P |
| 24915 | 102 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 13580 | isocitrate dehydrogenase | |||
| 13585 | R | SsoSE61ORF22640P (99% identity) | YCGR | Eal9976ORF13585P |
| 13590 | site-specific DNA recombinase | |||
| 24455 | DUF1998 domain-containing protein | |||
| 24460 | R | Eal8McrCP (100% identity) | Eal9976McrCP | |
| 24465 | R | EalA50McrBP (100% identity) | Eal9976McrBP | |
| 24470 | endoribonuclease SymE | |||