Escherichia coli EC3 |
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Putative Escherichia coli EC3 RM systems
Ref: Ruan,Z. unpublished
REBASE ref # 31265
| Sequence length: | GenBank #: | |
| Chromosome: | 4,681,922 bp | CP060979 |
| plasmid pEC3-3: | 106,787 bp | CP060981 |
REBASE acronym: EcosEC3
Org_num: 56798
All begin H9191_
| Type II | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1685 | cell division protein DamX | |||
| 1690 | M | M.UbaC1152DamP (100% identity) | GATC | M.EcosEC3DamP |
| 1695 | ribulose-phosphate 3-epimerase | |||
| 2310 | DUF2556 family protein | |||
| 2315 | M | M.Sso8ORF2545P (100% identity) | ATGCAT | M.EcosEC3ORF2315P |
| 2320 | DNA-binding transcriptional regulator Fis | |||
| 5385 | TraR/DksA family transcriptional regulator | |||
| 5390 | M | M.Ecosa7ORFBP (99% identity) | GATC | M.EcosEC3ORF5390P |
| 5395 | replication endonuclease | |||
| 11180 | DUF977 family protein | |||
| ??? | M | M.SsoSE61ORF20220P (100% identity) | M.EcosEC3ORF11185P | |
| 11190 | IS66-like element ISEc22 family transposase | |||
| 14985 | replication endonuclease | |||
| 14990 | M | M.SflN92ORF14970P (100% identity) | GATC | M.EcosEC3ORF14990P |
| 14995 | TraR/DksA family transcriptional regulator | |||
| 19530 | HNH endonuclease | |||
| 19535 | R | SflSTLE4ORF19250P (100% identity) | EcosEC3ORF19535P | |
| 19540 | McrC family protein | |||
| plasmid pEC3-3 | ||||
| 23650 | 101 aa hypothetical protein | |||
| 23655 | M | M.Sso11ORF329P (100% identity) | M.EcosEC3ORF23655P | |
| 23660 | 73 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 19535 | HNH endonuclease | |||
| 19540 | R | SflSTLE4McrCP (100% identity) | EcosEC3McrCP | |
| 19545 | R | SflSTLE4McrBP (100% identity) | EcosEC3McrBP | |
| 19550 | DUF4942 domain-containing protein | |||