Escherichia coli EC8 |
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Putative Escherichia coli EC8 RM systems
Ref: Ruan,Z. unpublished
REBASE ref # 31265
| Sequence length: | GenBank #: | |
| Chromosome: | 5,045,517 bp | CP060953 |
| plasmid pEC8-3: | 97,755 bp | CP060955 |
| plasmid pEC8-NDM-1: | 168,756 bp | CP060954 |
REBASE acronym: EcosEC8
Org_num: 56803
All begin H9195_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| plasmid pEC8-3 | ||||
| 26000 | IS1 family transposase | |||
| 26005 | R | KpnKPH1ORF27575P (100% identity) | CAAYNNNNNCTGG | EcosEC8ORF26005P |
| 26010 | S | S.SenBR076ORFFP (100% identity) | CAAYNNNNNCTGG | S.EcosEC8ORF26005P |
| 26015 | IS1 family transposase | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 3300 | drug/metabolite exporter YedA | |||
| 3305 | V | V.SflC32DcmP (74% identity) | CCWGG | V.EcosEC8DcmP |
| 3310 | M | M.SflC32DcmP (100% identity) | CCWGG | M.EcosEC8DcmP |
| 3315 | phosphohydrolase | |||
| 6680 | PerC family transcriptional regulator | |||
| 6685 | M | M.Eho218ORF16395P (100% identity) | GATC | M.EcosEC8ORF6685P |
| 6690 | DUF1382 family protein | |||
| 10805 | DNA-binding transcriptional regulator Fis | |||
| 10810 | M | M.SflC32ORFAP (100% identity) | ATGCAT | M.EcosEC8ORF10810P |
| 10815 | DUF2556 family protein | |||
| 11405 | ribulose-phosphate 3-epimerase | |||
| 11410 | M | M.SspPIBDamP (100% identity) | GATC | M.EcosEC8DamP |
| 11415 | cell division protein DamX | |||
| 20215 | PerC family transcriptional regulator | |||
| 20220 | M | M.Ecoppa1ORF9610P (100% identity) | GATC | M.EcosEC8ORF20220P |
| 20225 | LexA family transcriptional regulator | |||
| 24375 | TrmB family transcriptional regulator | |||
| 24380 | M | M.SflC32ORFBP (100% identity) | M.EcosEC8ORF24380P | |
| 24400 | tellurite resistance protein | |||
| plasmid pEC8-3 | ||||
| 25940 | 73 aa hypothetical protein | |||
| 25945 | M | M.UbapRSB107ORFAP (100% identity) | SAY | M.EcosEC8ORF25945P |
| 25950 | 102 aa hypothetical protein | |||
| plasmid pEC8-NDM-1 | ||||
| 25240 | 100 aa hypothetical protein | |||
| 25245 | M | M.YrupYR1ORFCP (100% identity) | CCNGG | M.EcosEC8ORF25245P |
| 25250 | 143 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 17000 | 26 aa hypothetical protein | |||
| 17005 | R | Eho218GmrDP (100% identity) | EcosEC8GmrSDP | |
| 17010 | endoribonuclease SymE | |||