Escherichia coli EC26 |
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Putative Escherichia coli EC26 RM systems
Ref: Ruan,Z. unpublished
REBASE ref # 31265
| Sequence length: | GenBank #: | |
| Chromosome: | 4,851,822 bp | CP060880 |
| plasmid pEC26-2: | 83,754 bp | CP060881 |
| plasmid pEC26-3: | 79,683 bp | CP060882 |
REBASE acronym: EcosEC26
Org_num: 56795
All begin H9209_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 3855 | transposase | |||
| 3860 | R | SspZ54ORF5015P (100% identity) | TGANNNNNNCTTC | EcosEC26ORF3865P |
| 3865 | M | M.SspZ54ORF5015P (100% identity) | TGANNNNNNCTTC | M.EcosEC26ORF3865P |
| 3870 | S | S.SspZ54ORF5015P (100% identity) | TGANNNNNNCTTC | S.EcosEC26ORF3865P |
| 3875 | AAA family ATPase | |||
| 5270 | 197 aa hypothetical protein | |||
| 5275 | R | Kqu610ORF5290P (100% identity) | GGANNNNNCTC | EcosEC26ORF5285P |
| 5280 | S | S.Ror24150ORF17255P (100% identity) | GGANNNNNCTC | S.EcosEC26ORF5285P |
| 5285 | M | M.KpnS1313ORF16435P (98% identity) | GGANNNNNCTC | M.EcosEC26ORF5285P |
| 5290 | 119 aa hypothetical protein | |||
| 20010 | DUF4942 domain-containing protein | |||
| 20015 | M | M.SflN110ORF19045P (100% identity) | CCANNNNNNNNTGAA | M.EcosEC26ORF20015P |
| ??? | S | S.SflN110ORF19045P (100% identity) | CCANNNNNNNNTGAA | S.EcosEC26ORF20015P |
| 20030 | R | SflN110ORF19045P (100% identity) | CCANNNNNNNNTGAA | EcosEC26ORF20015P |
| 20035 | 52 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1600 | cell division protein DamX | |||
| 1605 | M | M.UbaC1152DamP (100% identity) | GATC | M.EcosEC26DamP |
| 1610 | ribulose-phosphate 3-epimerase | |||
| 2215 | DUF2556 family protein | |||
| 2220 | M | M.Sso8ORF2545P (100% identity) | ATGCAT | M.EcosEC26ORF2220P |
| 2225 | DNA-binding transcriptional regulator Fis | |||
| 9025 | phosphohydrolase | |||
| 9030 | M | M.SflN92DcmP (100% identity) | CCWGG | M.EcosEC26DcmP |
| 9035 | V | V.SsoSE61DcmP (100% identity) | CCWGG | V.EcosEC26DcmP |
| 9040 | drug/metabolite exporter YedA | |||
| 9310 | 55 aa hypothetical protein | |||
| 9315 | M | M.SflFF87ORF9260P (100% identity) | GATC | M.EcosEC26ORF9315P |
| 9320 | 57 aa hypothetical protein | |||
| 11230 | DUF977 family protein | |||
| ??? | M | M.SsoSE61ORF20220P (100% identity) | M.EcosEC26ORF11235P | |
| 11240 | IS66-like element ISEc22 family transposase | |||
| 18075 | phage lysis protein EssD | |||
| 18080 | M | M.EcoR0233ORF17580P (100% identity) | M.EcosEC26ORF18080P | |
| 18085 | TrmB family transcriptional regulator | |||
| 18120 | LexA family transcriptional regulator | |||
| 18125 | M | M.KpnHs33ORF24645P (100% identity) | GATC | M.EcosEC26ORF18125P |
| 18130 | PerC family transcriptional regulator | |||
| 19990 | HNH endonuclease | |||
| 19995 | R | SflSTLE4ORF19250P (100% identity) | EcosEC26ORF19995P | |
| 20000 | McrC family protein | |||
| 20365 | sigma 54-interacting transcriptional regulator | |||
| 20370 | R | SflFF87ORF20150P (100% identity) | EcosEC26ORF20370P | |
| 20375 | IS21-like element IS100 family transposase | |||
| plasmid pEC26-2 | ||||
| 23365 | 104 aa hypothetical protein | |||
| 23370 | M | M.SsoST152ORF25555P (100% identity) | M.EcosEC26ORF23370P | |
| 23375 | 73 aa hypothetical protein | |||
| plasmid pEC26-3 | ||||
| 23880 | IS1 family transposase | |||
| 23885 | R | SflFF67ORF22305P (100% identity) | GCWGC | EcosEC26ORF23885P |
| 23890 | IS1 family transposase | |||
| 23945 | 103 aa hypothetical protein | |||
| 23950 | M | M.SflFF34ORF23425P (100% identity) | M.EcosEC26ORF23950P | |
| 23955 | 73 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 19995 | HNH endonuclease | |||
| 20000 | R | SflSTLE4McrCP (100% identity) | EcosEC26McrCP | |
| 20005 | R | SflSTLE4McrBP (100% identity) | EcosEC26McrBP | |
| 20010 | DUF4942 domain-containing protein | |||