Escherichia coli WCHEC025985 |
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Putative Escherichia coli WCHEC025985 RM systems
Ref: Long,H. et al. unpublished
REBASE ref # 26361
| Sequence length: | GenBank #: | |
| Chromosome: | 4,800,279 bp | CP043284 |
| plasmid p1_025985: | 86,177 bp | CP043288 |
| plasmid p2_025985: | 72,276 bp | CP043289 |
| plasmid pCMY166_025985: | 99,721 bp | CP043285 |
REBASE acronym: Eco25985
Org_num: 56815
All begin FYK42_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 4260 | 65 aa hypothetical protein | |||
| 4265 | R | SspZ54ORF5015P (100% identity) | TGANNNNNNCTTC | Eco25985ORF4270P |
| 4270 | M | M.SspZ54ORF5015P (100% identity) | TGANNNNNNCTTC | M.Eco25985ORF4270P |
| 4275 | S | S.SspZ54ORF5015P (100% identity) | TGANNNNNNCTTC | S.Eco25985ORF4270P |
| 4280 | AAA family ATPase | |||
| 14245 | GTPase family protein | |||
| 14250 | M | M.EcosEC21ORF13545P (100% identity) | M.Eco25985ORF14250P | |
| 14255 | IS1 family transposase | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1850 | cell division protein DamX | |||
| 1855 | M | M.UbaC1152DamP (100% identity) | GATC | M.Eco25985DamP |
| 1860 | ribulose-phosphate 3-epimerase | |||
| 9565 | phosphohydrolase | |||
| 9570 | M | M.SflSTLE1DcmP (100% identity) | CCWGG | M.Eco25985DcmP |
| 9575 | V | V.SsoSE61DcmP (100% identity) | CCWGG | V.Eco25985DcmP |
| 9580 | drug/metabolite exporter YedA | |||
| 18405 | LexA family transcriptional regulator | |||
| 18410 | M | M.Sso8ORF17910P (100% identity) | GATC | M.Eco25985ORF18410P |
| 18415 | PerC family transcriptional regulator | |||
| 21605 | LexA family transcriptional regulator | |||
| 21610 | M | M.EcoST05ORF2750P (100% identity) | GATC | M.Eco25985ORF21610P |
| 21615 | PerC family transcriptional regulator | |||
| 21675 | Eae protein | |||
| 21680 | M | M.EcoCP83ORF22545P (100% identity) | M.Eco25985ORF21680P | |
| 21685 | ead/Ea22-like family protein | |||
| plasmid p1_025985 | ||||
| 25845 | 61 aa hypothetical protein | |||
| 25860 | M | M.Eco19025ORF26245P (100% identity) | M.Eco25985ORF25860P | |
| 25865 | recombination-associated protein RdgC | |||
| plasmid p2_025985 | ||||
| 26005 | 59 aa hypothetical protein | |||
| 26010 | M | M.Xca80ORFEP (100% identity) | M.Eco25985ORF26010P | |
| 26015 | 73 aa hypothetical protein | |||
| plasmid pCMY166_025985 | ||||
| 23760 | 90 aa hypothetical protein | |||
| 23765 | M | M.SflN101ORF24625P (100% identity) | M.Eco25985ORF23765P | |
| 23770 | 73 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 13590 | isocitrate dehydrogenase | |||
| 13595 | R | EcosEC27McrCP (100% identity) | Eco25985McrCP | |
| 13600 | R | EcoteDMcrBP (100% identity) | Eco25985McrBP | |
| 13605 | helix-turn-helix domain-containing protein | |||
| 18195 | DUF4113 domain-containing protein | |||
| 18200 | R | EcosEC29GmrSDP (100% identity) | Eco25985GmrSDP | |
| 18205 | 168 aa hypothetical protein | |||