Klebsiella pneumoniae STLEFF_44 |
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Putative Klebsiella pneumoniae STLEFF_44 RM systems
Ref: Che,Y. et al. Microbiome 10 (1), 16 (2022)
REBASE ref # 33791
| Sequence length: | GenBank #: | |
| Chromosome: | 5,248,151 bp | CP058869 |
| plasmid unnamed1: | 283,086 bp | CP058870 |
| plasmid unnamed2: | 115,053 bp | CP058871 |
| plasmid unnamed3: | 103,039 bp | CP058872 |
REBASE acronym: KpnFF44
Org_num: 56662
All begin HZT31_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 3250 | 615 aa hypothetical protein | |||
| 3255 | R | Kpnu34ORF4855P (100% identity) | CATCNNNNNNTTYG | KpnFF44ORF3265P |
| 3260 | S | S1.Kpnu34ORF4855P (100% identity) | CATCNNNNNNTTYG | S1.KpnFF44ORF3265P |
| 3265 | M | M.Kpnu34ORF4855P (100% identity) | CATCNNNNNNTTYG | M.KpnFF44ORF3265P |
| 3270 | restriction endonuclease subunit S | |||
| 22525 | serine/threonine protein kinase | |||
| 22530 | M | M.KpnyORFBP (100% identity) | TTACNNNNNTAG | M.KpnFF44ORF22530P |
| 22535 | S | S.KpnyORFBP (100% identity) | TTACNNNNNTAG | S.KpnFF44ORF22530P |
| 22540 | R | KpnyORFBP (100% identity) | TTACNNNNNTAG | KpnFF44ORF22530P |
| 22545 | 580 aa hypothetical protein | |||
| plasmid unnamed3 | ||||
| 27840 | M48 family metallopeptidase | |||
| 27845 | R | KpnRT11ORF25835P (100% identity) | GTGANNNNNNNTGG | KpnFF44ORF27865P |
| 27850 | cold shock domain-containing protein | |||
| 27855 | YecA family protein | |||
| 27860 | S | S.Sma1761ORF1255P (100% identity) | GTGANNNNNNNTGG | S.KpnFF44ORF27865P |
| 27865 | M | M.Sma1761ORF1255P (100% identity) | GTGANNNNNNNTGG | M.KpnFF44ORF27865P |
| 27870 | IS1 family transposase | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 5980 | DUF3850 domain-containing protein | |||
| 5985 | M | M.KpnK82ORF6005P (100% identity) | M.KpnFF44ORF5985P | |
| 5990 | replication endonuclease | |||
| 6725 | 63 aa hypothetical protein | |||
| 6730 | M | M.KpnyORFGP (100% identity) | M.KpnFF44ORF6730P | |
| 6735 | DUF1317 family protein | |||
| 9145 | phosphohydrolase | |||
| 9150 | M | M.Kpnu28DcmP (100% identity) | CCWGG | M.KpnFF44DcmP |
| 9155 | V | V.Ksp2N3ORFEP (75% identity) | CCWGG | V.KpnFF44DcmP |
| 9160 | drug/metabolite exporter YedA | |||
| 19215 | helix-turn-helix domain-containing protein | |||
| 19220 | M | M.Kpn7851ORF13855P (100% identity) | M.KpnFF44ORF19220P | |
| 19225 | dcm methylase | |||
| 22555 | 239 aa hypothetical protein | |||
| 22560 | R | KpnyORFAP (100% identity) | GAAC | KpnFF44ORF22560P |
| 22565 | integrase arm-type DNA-binding domain-containing | |||
| plasmid unnamed1 | ||||
| 26885 | DNA replication protein DnaC | |||
| 26890 | M | M.Ksp1927ORF27750P (100% identity) | M.KpnFF44ORF26890P | |
| 26895 | R | Sen20597ORF9325P (100% identity) | CCWGG | KpnFF44ORF26890P |
| 26900 | 82 aa hypothetical protein | |||
| 26965 | 168 aa hypothetical protein | |||
| 26970 | M | M.Ksp1927ORF27830P (100% identity) | M.KpnFF44ORF26970P | |
| 26975 | 1125 aa hypothetical protein | |||
| plasmid unnamed2 | ||||
| 27020 | EAL domain-containing protein | |||
| 27025 | R | YpsR1ORFAP (100% identity) | CCWGG | KpnFF44ORF27030P |
| 27030 | M | M.SflLIN11ORF24665P (100% identity) | CCWGG | M.KpnFF44ORF27030P |
| 27035 | IS1 family transposase | |||
| plasmid unnamed3 | ||||
| 28215 | 73 aa hypothetical protein | |||
| 28220 | M | M.SmaQC11ORF52800P (100% identity) | M.KpnFF44ORF28220P | |
| 28225 | 76 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 22495 | IS3 family transposase | |||
| 22500 | R | KpnyMcrBP (98% identity) | KpnFF44McrBP | |
| 22505 | R | Kpntgc02McrCP (100% identity) | KpnFF44McrCP | |
| 22510 | IS3 family transposase | |||