Vibrio campbellii IFL1 |
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Putative Vibrio campbellii IFL1 RM systems
Ref: Lee,I.F. et al. unpublished
REBASE ref # 34011
| Sequence length: | GenBank #: | |
| chromosome 1: | 3,559,297 bp | CP092682 |
| plasmid pIFL1_1: | 293,418 bp | CP092684 |
| plasmid pIFL1_2: | 98,516 bp | CP092685 |
| plasmid pIFL1_4: | 31,093 bp | CP092687 |
REBASE acronym: VcaIFL1
Org_num: 56223
All begin MKR81_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| plasmid pIFL1_2 | ||||
| 27980 | DUF723 domain-containing protein | |||
| 27985 | R | Vpa5ORF15620P (99% identity) | VcaIFL1ORF27995P | |
| 27990 | ATP-binding protein | |||
| 27995 | M | M.Vph10884I (97% identity) | M.VcaIFL1ORF27995P | |
| 28000 | S | S.HaeGOM5ORF15865P (66% identity) | S.VcaIFL1ORF27995P | |
| 28005 | 244 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| chromosome 1 | ||||
| 1625 | AAA family ATPase | |||
| 1630 | M | M.VspG11DamP (100% identity) | GATC | M.VcaIFL1DamP |
| 1635 | ribulose-phosphate 3-epimerase | |||
| 10535 | M9 family metallopeptidase | |||
| 10540 | M | M.VcaBoB53ORF10645P (100% identity) | M.VcaIFL1ORF10540P | |
| 10545 | R | VcaBoB53ORF10645P (99% identity) | VcaIFL1ORF10540P | |
| 10550 | sphingomyelin phosphodiesterase | |||
| 11810 | DNA phosphorothioation-associated putative | |||
| 11815 | M | M.VpaBTXS2DndBP (99% identity) | M.VcaIFL1DndBP | |
| 11820 | DNA phosphorothioation system sulfurtransferase | |||
| 11815 | DNA sulfur modification protein DndB | |||
| 11820 | M | M.Vsp002DndCP (99% identity) | M.VcaIFL1DndCP | |
| 11825 | DNA sulfur modification protein DndD | |||
| 11820 | DNA phosphorothioation system sulfurtransferase | |||
| 11825 | M | M.VpaBM21ADndDP (91% identity) | M.VcaIFL1DndDP | |
| 11830 | DNA sulfur modification protein DndE | |||
| 11825 | DNA sulfur modification protein DndD | |||
| 11830 | M | M.Vfl1145DndEP (93% identity) | M.VcaIFL1DndEP | |
| 11835 | AAA family ATPase | |||
| 11840 | DUF262 domain-containing protein | |||
| 11845 | R | VcaC011DptHP (98% identity) | VcaIFL1DptHP | |
| 11850 | DNA phosphorothioation-dependent restriction | |||
| 11845 | DNA phosphorothioation-dependent restriction | |||
| 11850 | R | Vsp002DptGP (99% identity) | VcaIFL1DptGP | |
| 11855 | DNA phosphorothioation-dependent restriction | |||
| 11850 | DNA phosphorothioation-dependent restriction | |||
| 11855 | R | Vsp43153DptFP (98% identity) | VcaIFL1DptFP | |
| 11860 | WYL domain-containing protein | |||
| plasmid pIFL1_1 | ||||
| 27235 | 230 aa hypothetical protein | |||
| 27240 | M | M.VchW7GORF20440P (64% identity) | M.VcaIFL1ORF27240P | |
| 27245 | ATP-dependent helicase | |||
| plasmid pIFL1_2 | ||||
| 28040 | 89 aa hypothetical protein | |||
| 28045 | M | M.AhyNIH1ORF22200P (53% identity) | M.VcaIFL1ORF28045P | |
| 28050 | 127 aa hypothetical protein | |||
| plasmid pIFL1_4 | ||||
| 28685 | DUF3085 domain-containing protein | |||
| 28690 | R | Vch19226ORF783P (53% identity) | R1.VcaIFL1ORF28695P | |
| 28695 | M | M2.Vsp002ORF27455P (89% identity) | M.VcaIFL1ORF28695P | |
| 28700 | R | Vsp002ORF27455P (99% identity) | R2.VcaIFL1ORF28695P | |
| 28705 | nucleotide pyrophosphohydrolase | |||
| Orphan M | ||||
| ORF | Gene | Most similar | Specificity | Name |
| plasmid pIFL1_1 | ||||
| 26685 | YjfI family protein | |||
| 26690 | M | M.VpaVP92ORFAP (57% identity) | M.VcaIFL1ORF26690P | |
| 26695 | 103 aa hypothetical protein | |||