Mannheimia haemolytica 0728 |
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Putative Mannheimia haemolytica 0728 RM systems
Ref: Boguski,M. and Hill,J.E. unpublished
REBASE ref # 34024
Complete sequence: 2,590,907 bp
GenBank #: CP059328
REBASE acronym: Mha0728
Org_num: 56463
All begin H1D02_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 2035 | YacL family protein | |||
| 2040 | M | M.MhaD171ORF2370P (99% identity) | M.Mha0728ORF2040P | |
| 2045 | S | S.Mhas184ORF7710P (99% identity) | TGAANNNNNTTC | S.Mha0728ORF2040P |
| 2050 | FRG domain-containing protein | |||
| 2055 | R | Mha0729ORF4675P (100% identity) | Mha0728ORF2040P | |
| 2060 | bifunctional [glutamate--ammonia | |||
| 4895 | bifunctional glutamate--cysteine ligase | |||
| 4900 | S | S2.Mha9380IIIP (99% identity) | S2.Mha0728ORF4920P | |
| 4905 | tyrosine-type recombinase/integrase | |||
| 4910 | S | S1.Mha9380III (99% identity) | GNGAYNNNNNNNRTTG | S1.Mha0728ORF4920P |
| 4915 | DNA binding domain-containing protein | |||
| 4920 | M | M.Mha0745ORF2905P (99% identity) | M.Mha0728ORF4920P | |
| 4925 | R | Pba12565ORF1955P (99% identity) | Mha0728ORF4920P | |
| 4930 | phosphatidylserine decarboxylase | |||
| 9975 | methionine synthase | |||
| 9980 | M | M.Mha0597ORF4300P (98% identity) | M.Mha0728ORF9980P | |
| 9985 | S | S1.Mha0746ORF7220P (100% identity) | S1.Mha0728ORF9980P | |
| 9990 | S | S2.Mhas184ORF2820P (99% identity) | CAACNNNNNTC | S2.Mha0728ORF9980P |
| 9995 | 211 aa hypothetical protein | |||
| 10380 | DNA topoisomerase (ATP-hydrolyzing) subunit A | |||
| 10385 | M | M.MhaD171ORF10245P (100% identity) | M.Mha0728ORF10385P | |
| 10390 | S | S.Mha0729ORF125P (99% identity) | GAYNNNNNNTAYG | S.Mha0728ORF10385P |
| 10395 | anticodon nuclease | |||
| 10400 | R | Mha0729ORF125P (99% identity) | Mha0728ORF10385P | |
| 10405 | ABC transporter ATP-binding protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 2465 | DNA topoisomerase IV subunit B | |||
| 2470 | M | M.Mha39433ORF8180P (100% identity) | M.Mha0728ORF2470P | |
| 2475 | IS481 family transposase | |||
| 2480 | DUF417 family protein | |||
| 2485 | R | Mha0760ORF10320P (99% identity) | Mha0728ORF2470P | |
| 2490 | IS481 family transposase | |||
| 3010 | sodium-dependent transporter | |||
| 3015 | M | M.MhaD171ORF3310P (97% identity) | GATC | M.Mha0728ORF3015P |
| 3020 | 3-dehydroquinate synthase | |||
| 3770 | DUF968 domain-containing protein | |||
| 3775 | M | M.Mha9712ORF539P (100% identity) | M.Mha0728ORF3775P | |
| 3780 | conserved phage C-terminal domain-containing | |||
| 3885 | Com family DNA-binding transcriptional | |||
| 3890 | M | M.MhaD171ORF4180P (100% identity) | BA | M.Mha0728ORF3890P |
| 3895 | DUF4224 domain-containing protein | |||
| 5575 | replication protein | |||
| 5580 | M | M.MhaA2ORF1731P (100% identity) | GATC | M.Mha0728ORF5580P |
| 5585 | DUF1367 family protein | |||
| 10875 | enoyl-CoA hydratase | |||
| 10880 | M | M.MhaD171ORF10745P (87% identity) | M.Mha0728ORF10880P | |
| 10885 | DNA-binding domain-containing protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 260 | IS481 family transposase | |||
| 265 | R | MhaD171ORF875P (100% identity) | GACAT | Mha0728ORF270P |
| ??? | M | M.Mha0745ORF11135P (100% identity) | GACAT | M.Mha0728ORF270P |
| 280 | trimethylamine-N-oxide reductase TorA | |||
| 1740 | DNA topoisomerase (ATP-hydrolyzing) subunit B | |||
| 1745 | R | Mha0729ORF4385P (100% identity) | GTTAAT | Mha0728ORF1750P |
| 1750 | M | M.Mha0746ORF12960P (99% identity) | GTTAAT | M.Mha0728ORF1750P |
| 1755 | adenine methyltransferase | |||