Thermus brockianus SNM4-1 |
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Putative Thermus brockianus SNM4-1 RM systems
Ref: Miyazaki,K. unpublished
REBASE ref # 33021
| Sequence length: | GenBank #: | |
| Chromosome: | 2,046,081 bp | AP025593 |
| plasmid pTbrSNM4-1b: | 352,526 bp | AP025594 |
| plasmid pTbrSNM4-1c: | 25,316 bp | AP025595 |
REBASE acronym: Tbr41
Org_num: 55983
All begin TbrSNM41_
| Type II | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 17530 | 223 aa hypothetical protein | |||
| 17540 | M | M.TbrGE1II (100% identity) | CTCGAG | M.Tbr41ORF17540P |
| 17550 | pseudouridine synthase | |||
| plasmid pTbrSNM4-1b | ||||
| 22580 | cell filamentation protein Fic | |||
| 22590 | M | M.TbrGE1ORF2559P (100% identity) | M.Tbr41ORF22590P | |
| 22600 | 83 aa hypothetical protein | |||
| 23060 | IS4 family transposase | |||
| 23070 | RM | TthTF28ORF22440P (41% identity) | Tbr41ORF23070P | |
| 23080 | helicase | |||
| plasmid pTbrSNM4-1c | ||||
| 25110 | 302 aa hypothetical protein | |||
| 25120 | M | M.PmeK22ORF707P (60% identity) | M.Tbr41ORF25120P | |
| 25130 | integrase | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| plasmid pTbrSNM4-1b | ||||
| 24150 | IS4 family transposase | |||
| 24160 | M | M.TteR1ORF3466P (68% identity) | M.Tbr41ORF24160P | |
| 24170 | 281 aa hypothetical protein | |||
| 24180 | R | CcaT49ORF16P (80% identity) | Tbr41ORF24160P | |
| 24190 | AbrB family transcriptional regulator | |||