Ref: Miyazaki,K. unpublished

REBASE ref # 33021

Sequence length:GenBank #:
Chromosome: 2,126,669 bp AP025596
plasmid pTthSNM1-1b: 102,381 bp AP025597
plasmid pTthSNM1-1c: 23,201 bp AP025598
plasmid pTthSNM1-1d: 10,007 bp AP025599

REBASE acronym: TthSNM11

Org_num: 55984

 

All begin TthSNM11_

Type II
ORF Gene Most similar Specificity Name
 
Chromosome
 
4460 pseudouridine synthase
4470 M M.TthSNM33ORF4330P (99% identity) M.TthSNM11ORF4470P
4480 105 aa hypothetical protein
 
12340 140 aa hypothetical protein
12350 RM TthSNM33ORF21280P (96% identity) TthSNM11ORF12350P
12360 helicase
 
13210 nucleotidyltransferase
13220 M M.TthSNM33ORF11500P (100% identity) M.TthSNM11ORF13220P
13230 ATPase AAA
 
plasmid pTthSNM1-1b
 
24020 74 aa hypothetical protein
24030 M M.TthN1ORF11590P (93% identity) M.TthSNM11ORF24030P
24040 58 aa hypothetical protein
 
24360 98 aa hypothetical protein
24370 M M.TthSNM17ORF22990BP (100% identity) M.TthSNM11ORF24370BP
24380 transposase
24390 M M.TthSNM17ORF22990AP (74% identity) M.TthSNM11ORF24370AP
24400 twitching motility protein PilT
 
plasmid pTthSNM1-1c
 
25070 309 aa hypothetical protein
??? M M.UbaMSORFK12P (18% identity) M.TthSNM11ORF25080P
25090 integrase
 
plasmid pTthSNM1-1d
 
25250 116 aa hypothetical protein
??? RM TthSNM17ORFAP (98% identity) TthSNM11ORFAP
Type III
ORF Gene Most similar Specificity Name
 
Chromosome
 
2970 73 aa hypothetical protein
2980 M M.TthSNM17ORF2980P (97% identity) GMGAGC M.TthSNM11ORF2980P
3000 120 aa hypothetical protein