Thermus thermophilus SNM1-1 |
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Putative Thermus thermophilus SNM1-1 RM systems
Ref: Miyazaki,K. unpublished
REBASE ref # 33021
| Sequence length: | GenBank #: | |
| Chromosome: | 2,126,669 bp | AP025596 |
| plasmid pTthSNM1-1b: | 102,381 bp | AP025597 |
| plasmid pTthSNM1-1c: | 23,201 bp | AP025598 |
| plasmid pTthSNM1-1d: | 10,007 bp | AP025599 |
REBASE acronym: TthSNM11
Org_num: 55984
All begin TthSNM11_
| Type II | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 4460 | pseudouridine synthase | |||
| 4470 | M | M.TthSNM33ORF4330P (99% identity) | M.TthSNM11ORF4470P | |
| 4480 | 105 aa hypothetical protein | |||
| 12340 | 140 aa hypothetical protein | |||
| 12350 | RM | TthSNM33ORF21280P (96% identity) | TthSNM11ORF12350P | |
| 12360 | helicase | |||
| 13210 | nucleotidyltransferase | |||
| 13220 | M | M.TthSNM33ORF11500P (100% identity) | M.TthSNM11ORF13220P | |
| 13230 | ATPase AAA | |||
| plasmid pTthSNM1-1b | ||||
| 24020 | 74 aa hypothetical protein | |||
| 24030 | M | M.TthN1ORF11590P (93% identity) | M.TthSNM11ORF24030P | |
| 24040 | 58 aa hypothetical protein | |||
| 24360 | 98 aa hypothetical protein | |||
| 24370 | M | M.TthSNM17ORF22990BP (100% identity) | M.TthSNM11ORF24370BP | |
| 24380 | transposase | |||
| 24390 | M | M.TthSNM17ORF22990AP (74% identity) | M.TthSNM11ORF24370AP | |
| 24400 | twitching motility protein PilT | |||
| plasmid pTthSNM1-1c | ||||
| 25070 | 309 aa hypothetical protein | |||
| ??? | M | M.UbaMSORFK12P (18% identity) | M.TthSNM11ORF25080P | |
| 25090 | integrase | |||
| plasmid pTthSNM1-1d | ||||
| 25250 | 116 aa hypothetical protein | |||
| ??? | RM | TthSNM17ORFAP (98% identity) | TthSNM11ORFAP | |
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 2970 | 73 aa hypothetical protein | |||
| 2980 | M | M.TthSNM17ORF2980P (97% identity) | GMGAGC | M.TthSNM11ORF2980P |
| 3000 | 120 aa hypothetical protein | |||