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Putative Thermus thermophilus SNM1-7 RM systems
Ref: Miyazaki,K. unpublished
REBASE ref # 33021
Sequence length: | GenBank #: | |
Chromosome: | 1,870,712 bp | AP025603 |
plasmid pTthSNM1-7b: | 239,363 bp | AP025604 |
plasmid pTthSNM1-7c: | 132,169 bp | AP025605 |
plasmid pTthSNM1-7d: | 22,908 bp | AP025606 |
plasmid pTthSNM1-7f: | 9,390 bp | AP025608 |
REBASE acronym: TthSNM17
Org_num: 55985
All begin TthSNM17_
Type II | ||||
---|---|---|---|---|
ORF | Gene | Most similar | Specificity | Name |
Chromosome | ||||
4560 | pseudouridine synthase | |||
4570 | M | M.TthSNM33ORF4330P (99% identity) | M.TthSNM17ORF4570P | |
4580 | 366 aa hypothetical protein | |||
6870 | 50 aa hypothetical protein | |||
6880 | M | M.TthTF28ORF14200P (99% identity) | M.TthSNM17ORF6880P | |
6890 | 330 aa hypothetical protein | |||
plasmid pTthSNM1-7b | ||||
22190 | 140 aa hypothetical protein | |||
22200 | RM | TthSNM33ORF21280P (94% identity) | TthSNM17ORF22200P | |
22210 | helicase | |||
plasmid pTthSNM1-7c | ||||
22980 | twitching motility protein PilT | |||
22990 | M | M.TthSNM11ORF24370AP (74% identity) | M.TthSNM17ORF22990AP | |
23000 | transposase | |||
23010 | M | M.TthSNM11ORF24370BP (100% identity) | M.TthSNM17ORF22990BP | |
23020 | 98 aa hypothetical protein | |||
23800 | 58 aa hypothetical protein | |||
23810 | M | M.TthSNM33ORF23950P (94% identity) | M.TthSNM17ORF23810P | |
23820 | 89 aa hypothetical protein | |||
plasmid pTthSNM1-7d | ||||
24290 | 366 aa hypothetical protein | |||
24300 | M | M.TthTF28ORF22030P (56% identity) | M.TthSNM17ORF24300P | |
24310 | 280 aa hypothetical protein | |||
plasmid pTthSNM1-7f | ||||
24680 | 116 aa hypothetical protein | |||
??? | RM | TthSNM11ORFAP (98% identity) | TthSNM17ORFAP | |
Type III | ||||
ORF | Gene | Most similar | Specificity | Name |
Chromosome | ||||
2960 | 189 aa hypothetical protein | |||
2970 | R | TthHC11ORF2940P (7% identity) | GMGAGC | TthSNM17ORF2980P |
2980 | M | M.TthSNM11ORF2980P (97% identity) | GMGAGC | M.TthSNM17ORF2980P |
2990 | 209 aa hypothetical protein |