Ref: Miyazaki,K. unpublished

REBASE ref # 33021

Sequence length:GenBank #:
Chromosome: 1,870,712 bp AP025603
plasmid pTthSNM1-7b: 239,363 bp AP025604
plasmid pTthSNM1-7c: 132,169 bp AP025605
plasmid pTthSNM1-7d: 22,908 bp AP025606
plasmid pTthSNM1-7f: 9,390 bp AP025608

REBASE acronym: TthSNM17

Org_num: 55985

 

All begin TthSNM17_

Type II
ORF Gene Most similar Specificity Name
 
Chromosome
 
4560 pseudouridine synthase
4570 M M.TthSNM33ORF4330P (99% identity) M.TthSNM17ORF4570P
4580 366 aa hypothetical protein
 
6870 50 aa hypothetical protein
6880 M M.TthTMYaORF15680P (99% identity) M.TthSNM17ORF6880P
6890 330 aa hypothetical protein
 
plasmid pTthSNM1-7b
 
22190 140 aa hypothetical protein
22200 RM TthSNM33ORF21280P (94% identity) TthSNM17ORF22200P
22210 helicase
 
plasmid pTthSNM1-7c
 
22980 twitching motility protein PilT
22990 M M.TthSNM11ORF24370AP (74% identity) M.TthSNM17ORF22990AP
23000 transposase
23010 M M.TthSNM11ORF24370BP (100% identity) M.TthSNM17ORF22990BP
23020 98 aa hypothetical protein
 
23800 58 aa hypothetical protein
23810 M M.TthSNM33ORF23950P (94% identity) M.TthSNM17ORF23810P
23820 89 aa hypothetical protein
 
plasmid pTthSNM1-7d
 
24290 366 aa hypothetical protein
24300 M M.TthAA11ORF21850P (56% identity) M.TthSNM17ORF24300P
24310 280 aa hypothetical protein
 
plasmid pTthSNM1-7f
 
24680 116 aa hypothetical protein
??? RM TthSNM11ORFAP (98% identity) TthSNM17ORFAP
Type III
ORF Gene Most similar Specificity Name
 
Chromosome
 
2960 189 aa hypothetical protein
2970 R TthHC11ORF2940P (7% identity) GMGAGC TthSNM17ORF2980P
2980 M M.TthSNM11ORF2980P (97% identity) GMGAGC M.TthSNM17ORF2980P
2990 209 aa hypothetical protein