Nitrobacter hamburgensis X14 |
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Putative Nitrobacter hamburgensis X14 RM systems
Ref: Copeland,A. et al. unpublished
REBASE ref # 10588
| Sequence length: | GenBank #: | |
| Chromosome: | 4,406,967 bp | CP000319 (NC_007964) |
| plasmid 2: | 188,318 bp | CP000321 (NC_007960) |
REBASE acronym: NhaX
Org_num: 4300
All begin Nham_
| Type II | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 568 | Recombinase | |||
| 569 | M | M.MspL211ORF18300P (76% identity) | M.NhaXIV | |
| 570 | 230 aa hypothetical protein | |||
| 802 | 163 aa hypothetical protein | |||
| 803 | M | M.NhaXORF842P (90% identity) | M.NhaXORF803P | |
| 804 | Catalase | |||
| 841 | 163 aa hypothetical protein | |||
| 842 | M | M.NhaXORF803P (90% identity) | M.NhaXORF842P | |
| 843 | Catalase | |||
| 1184 | Phage uncharacterized protein-like protein | |||
| 1185 | M | M.BbaSG6CORF4195P (60% identity) | M.NhaXORF1185P | |
| 1186 | 95 aa hypothetical protein | |||
| 1352 | helicase-like protein | |||
| 1353 | M | M.MheH2ORF20855P (63% identity) | M.NhaXORF1353P | |
| 1354 | 193 aa conserved hypothetical protein | |||
| 2514 | 316 aa hypothetical protein | |||
| ??? | M | M.Rle1689ORF13800P (27% identity) | CGATCG | M.NhaXORF2515AP |
| 2516 | tISRso5; ISRSO5-transposase protein | |||
| ??? | M | M.Bsps184ORF2730P (38% identity) | CGATCG | M.NhaXORF2515BP |
| 2517 | V | V.SspSYK6ORF26790P (60% identity) | V.NhaXORF2515P | |
| 2518 | HNH nuclease | |||
| 3224 | protein of unknown function, zinc | |||
| 3225 | M | M.NvuAb1ORF13935P (94% identity) | GANTC | M.NhaXII |
| 3226 | glutathione S-transferase-like protein | |||
| 3844 | 437 aa conserved hypothetical protein | |||
| 3845 | RM | Bca60ORF1250P (61% identity) | CAAGRAG | NhaXI |
| 3846 | 74 aa conserved hypothetical protein | |||
| plasmid 2 | ||||
| 4498 | 149 aa hypothetical protein | |||
| 4499 | RM | Mlo582ORF22220P (71% identity) | NhaXORF4499P | |
| 4500 | DEAD/DEAH box helicase-like | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 581 | 256 aa conserved hypothetical protein | |||
| 582 | M | M.SspU334ORF17250P (58% identity) | M.NhaXIII | |
| 583 | type III restriction endonuclease subunit R | |||
| 582 | DNA methylase N-4/N-6 | |||
| 583 | R | SteJH3ORF9450P (86% identity) | NhaXORF582P | |
| 584 | 155 aa hypothetical protein | |||
| 4025 | 391 aa hypothetical protein | |||
| ??? | R | NhaXORF582P (37% identity) | NhaXORF4026P | |
| 4027 | plasmid maintenance system antidote | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| plasmid 2 | ||||
| 4501 | 409 aa conserved hypothetical protein | |||
| 4502 | R | Bsp681McrBP (94% identity) | NhaXMcrBP | |
| 4503 | R | Bsp681McrCP (93% identity) | NhaXMcrCP | |
| 4504 | 227 aa hypothetical protein | |||