Putative Nodularia sphaerocarpa UHCC 0038 RM systems
Ref: Ahmed,M.N. et al. unpublished
REBASE ref # 33883
Complete sequence: 5,451,672 bp
GenBank #: CP060140
REBASE acronym: Nsp0038
Org_num: 55823
All begin BDGGKGIB_
Type I | ||||
---|---|---|---|---|
ORF | Gene | Most similar | Specificity | Name |
204 | 79 aa hypothetical protein | |||
205 | M | M.Csp4074ORF41570P (78% identity) | M.Nsp0038ORF205P | |
206 | 193 aa hypothetical protein | |||
601 | Glutamate dehydrogenase | |||
602 | R | Acy7122ORF4817P (95% identity) | Nsp0038ORF603P | |
603 | M | M.Acy7122ORF4817P (56% identity) | M.Nsp0038ORF603P | |
604 | tRNA-specific adenosine deaminase | |||
1098 | 124 aa hypothetical protein | |||
1100 | S | S.TdiTDORF5205P (45% identity) | GATANNNNNNTTAC | S.Nsp0038I |
1101 | M | M.Pmu1806ORFOP (82% identity) | GATANNNNNNTTAC | M.Nsp0038I |
1102 | R | Pmu1806ORFOP (72% identity) | GATANNNNNNTTAC | Nsp0038IP |
1103 | Pentapeptide repeat protein Rfr32 | |||
2978 | 100 aa hypothetical protein | |||
2979 | M | M.Nsp0039ORF1226P (98% identity) | M.Nsp0038ORF2979P | |
2980 | 96 aa hypothetical protein | |||
2981 | 98 aa hypothetical protein | |||
2982 | S | S.Cpi21068ORF1540P (41% identity) | S.Nsp0038ORF2979P | |
2983 | R | Nsp9414ORF12720P (96% identity) | Nsp0038ORF2979P | |
2984 | competence-damage inducible protein | |||
Type II | ||||
ORF | Gene | Most similar | Specificity | Name |
624 | UvrABC system protein C | |||
625 | M | M.Ael3563ORF1170P (45% identity) | M.Nsp0038ORF625P | |
626 | 65 aa hypothetical protein | |||
704 | 486 aa hypothetical protein | |||
705 | M | M.Nsp0039DndEP (91% identity) | M.Nsp0038DndEP | |
706 | Endoribonuclease MazF | |||
707 | 83 aa hypothetical protein | |||
708 | M | M.Nsp0039DndDP (96% identity) | M.Nsp0038DndDP | |
709 | 135 aa hypothetical protein | |||
709 | 135 aa hypothetical protein | |||
710 | M | M.CovDndCP (91% identity) | M.Nsp0038DndCP | |
711 | 29 aa hypothetical protein | |||
900 | 249 aa hypothetical protein | |||
901 | C | C.Ael3563ORF16485P (90% identity) | C.Nsp0038ORF903P | |
902 | R | Tte7101ORF10480P (78% identity) | Nsp0038ORF903P | |
903 | M | M.Nsp9414ORF50720P (96% identity) | M.Nsp0038ORF903P | |
904 | Tryptophan--tRNA ligase | |||
951 | 79 aa hypothetical protein | |||
952 | M | M.Dsp315AORF329P (84% identity) | ATGCAT | M.Nsp0038IV |
953 | 53 aa hypothetical protein | |||
953 | 53 aa hypothetical protein | |||
954 | M | M.Acy7122ORF2831P (85% identity) | M.Nsp0038ORF954P | |
955 | R | Acy7122ORF2831P (91% identity) | Nsp0038ORF954P | |
956 | Tryptophan-rich sensory protein | |||
1372 | Ribonuclease VapC2 | |||
1373 | M | M.Nsp596ORF12145P (96% identity) | TCCGGA | M.Nsp0038II |
1374 | 281 aa hypothetical protein | |||
1436 | Protein PatA | |||
1437 | RM | Nsp9414ORF20700P (95% identity) | Nsp0038ORF1437P | |
1438 | ATP-dependent zinc metalloprotease FtsH 2 | |||
1467 | Demethylphylloquinone reductase NdbB | |||
1468 | RM | Ski73ORF4940P (71% identity) | Nsp0038ORF1468P | |
1470 | 291 aa hypothetical protein | |||
1830 | 196 aa hypothetical protein | |||
1831 | M | M.Nsp0039ORF2341P (96% identity) | M.Nsp0038ORF1831P | |
1832 | R | Nsp9414ORF29830P (96% identity) | Nsp0038ORF1831P | |
1833 | C | C.Nsp9414ORF29830P (91% identity) | C.Nsp0038ORF1831P | |
1834 | HTH-type transcriptional regulator GltC | |||
2194 | 499 aa hypothetical protein | |||
2195 | RM | Nsp9414ORF10950P (90% identity) | Nsp0038ORF2195P | |
2196 | DNA polymerase I | |||
2459 | 70 aa hypothetical protein | |||
2460 | M | M.Nsp0039ORFDP (88% identity) | M.Nsp0038ORF2460P | |
2461 | Cyanate hydratase | |||
2607 | Lipid-A-disaccharide synthase | |||
2608 | M | M.Nsp9414ORF2726P (88% identity) | M.Nsp0038ORF2608P | |
2609 | 49 aa hypothetical protein | |||
2654 | 120 aa hypothetical protein | |||
2655 | RM | Ael3563ORF13230P (83% identity) | Nsp0038ORF2655P | |
2656 | ABC transporter ATP-binding protein | |||
2664 | Deoxyribose-phosphate aldolase 1 | |||
2665 | M | M.Nsp596ORF1130P (86% identity) | M.Nsp0038ORF2665P | |
2666 | 480 aa hypothetical protein | |||
2771 | 52 aa hypothetical protein | |||
2772 | RM | Pru82ORF901P (75% identity) | Nsp0038ORF2772P | |
2773 | 127 aa hypothetical protein | |||
2780 | Sorbitol dehydrogenase | |||
2781 | RM | Afl14aORF7835P (67% identity) | Nsp0038ORF2781P | |
2782 | 105 aa hypothetical protein | |||
3004 | 160 aa hypothetical protein | |||
3005 | M | M.Nsp9414ORF21826P (89% identity) | GATC | M.Nsp0038V |
3006 | 77 aa hypothetical protein | |||
3041 | 665 aa hypothetical protein | |||
3042 | R | Nsp9414ORF11980P (97% identity) | Nsp0038ORF3043P | |
3043 | M | M.Nsp0038ORF3049P (87% identity) | M.Nsp0038ORF3043P | |
3044 | 70 aa hypothetical protein | |||
3048 | 479 aa hypothetical protein | |||
3049 | M | M.Nsp9414ORF11980P (88% identity) | M.Nsp0038ORF3049P | |
3050 | 126 aa hypothetical protein | |||
4342 | 197 aa hypothetical protein | |||
4343 | M | M.CovORF3325P (78% identity) | AGTACT | M.Nsp0038III |
4344 | Leucine--tRNA ligase | |||
Type IV | ||||
ORF | Gene | Most similar | Specificity | Name |
3604 | 145 aa hypothetical protein | |||
3605 | R | Asp90McrBP (38% identity) | Nsp0038McrBP | |
3606 | R | Dsp315AMcrCP (74% identity) | Nsp0038McrCP | |
3607 | Sulfate/thiosulfate import ATP-binding protein |