Campylobacter species RM12651 |
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Putative Campylobacter species RM12651 RM systems
Ref: Miller,W.G. et al. unpublished
REBASE ref # 33820
| Sequence length: | GenBank #: | |
| Chromosome: | 2,058,364 bp | CP059600 |
| plasmid pBRAN1: | 123,334 bp | CP059601 |
REBASE acronym: Csp12651
Org_num: 55547
All begin AVBRAN_, AVBRAN_a
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 121 | membrane protein | |||
| 122 | M | M.Csp5004ORF76P (83% identity) | M.Csp12651ORF122P | |
| 123 | 427 aa hypothetical protein | |||
| 124 | RhuM family protein | |||
| 125 | S | S2.Fen1006II (29% identity) | S.Csp12651ORF122P | |
| 126 | membrane protein | |||
| 127 | transglycosylase domain-containing protein | |||
| 128 | R | Csp5004ORF76P (96% identity) | Csp12651ORF122P | |
| 129 | 212 aa hypothetical protein | |||
| 1088 | inner membrane protein, CreD family | |||
| 1089 | M | M.Csp5004ORF1532P (95% identity) | M.Csp12651ORF1089P | |
| 1090 | 167 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 462 | DnaJ domain-containing protein | |||
| 463 | M | M.Csp12651ORF1950P (93% identity) | M.Csp12651ORF463P | |
| 1174 | zinc-dependent alcohol dehydrogenase / quinone | |||
| 1175 | R | Csp835ORF1635P (60% identity) | Csp12651ORF1176P | |
| 1176 | M | M.Csp835ORF1635P (81% identity) | M.Csp12651ORF1176P | |
| 1177 | zinc-binding dehydrogenase | |||
| 1328 | 183 aa hypothetical protein | |||
| 1329 | M | M.Csp12651ORF1532P (79% identity) | M.Csp12651ORF1329P | |
| 1330 | 57 aa hypothetical protein | |||
| 1355 | 110 aa hypothetical protein | |||
| 1356 | M | M.Man1340ORF832P (32% identity) | M1.Csp12651ORF1356P | |
| 1357 | M | M1.Mfl787ORF1585P (50% identity) | M2.Csp12651ORF1356P | |
| 1358 | type IIS cytosine-specific DNA | |||
| 1357 | type IIS adenine-specific DNA methyltransferase | |||
| 1358 | M | M1.HpyNCI23ORFWP (44% identity) | M.Csp12651ORF1358P | |
| 1359 | 271 aa hypothetical protein | |||
| 1531 | chaperone protein HtpG | |||
| 1532 | M | M.Csp5004ORF486P (82% identity) | M.Csp12651ORF1532P | |
| 1533 | 223 aa hypothetical protein | |||
| 1658 | type IIS restriction/modification system, | |||
| 1659 | R | AciI (34% identity) | Csp12651ORF1661P | |
| 1660 | M | M.AciI (26% identity) | M2.Csp12651ORF1661P | |
| 1661 | M | M1.Lph2132ORFBP (55% identity) | M1.Csp12651ORF1661P | |
| 1662 | 1,4-dihydroxy-6-naphthoate synthase | |||
| 1949 | toxin-antitoxin system, toxin component, YafQ | |||
| 1950 | M | M.Csp12651ORF463P (93% identity) | M.Csp12651ORF1950P | |
| 1951 | 155 aa hypothetical protein | |||
| plasmid pBRAN1 | ||||
| 73 | 182 aa hypothetical protein | |||
| 74 | M | M.Cje4231ORF2270P (89% identity) | M.Csp12651ORF74P | |
| 75 | 168 aa hypothetical protein | |||
| 99 | 554 aa hypothetical protein | |||
| 100 | M | M.HquMP1ORFJP (46% identity) | M.Csp12651ORF100P | |
| 101 | 109 aa hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1108 | phosphoglucose isomerase (Entner-Doudoroff | |||
| 1109 | M | M.Mma225ORF4370P (45% identity) | M.Csp12651ORF1109P | |
| 1110 | R | Csp5004ORF838P (78% identity) | Csp12651ORF1109P | |
| 1111 | 189 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1871 | argininosuccinate lyase | |||
| 1872 | R | Csp5004McrCP (80% identity) | Csp12651McrCP | |
| 1873 | R | Csp5004McrBP (44% identity) | Csp12651McrBP | |
| 1874 | membrane protein | |||