Klebsiella pneumoniae KP-135LU |
| [index] - [schematics] - [save as Word doc] |
|
|
|
Putative Klebsiella pneumoniae KP-135LU RM systems
Ref: Di Pilato,V. et al. unpublished
REBASE ref # 33822
| Sequence length: | GenBank #: | |
| Chromosome: | 5,374,086 bp | CP070890 |
| plasmid pKP-135LU_HIB-FIB: | 341,276 bp | CP070891 |
| plasmid pKP-135LU_R: | 42,041 bp | CP070893 |
| plasmid pvB_Kpn_135LU_ST147: | 112,868 bp | CP070892 |
REBASE acronym: Kpn135LU
Org_num: 55560
All begin HZC98_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 22790 | 322 aa hypothetical protein | |||
| 22795 | R | Ksp4251ORF21690P (100% identity) | GAAYNNNNNNNCTGG | Kpn135LUORF22800P |
| 22800 | M | M.Ksp4251ORF21690P (100% identity) | GAAYNNNNNNNCTGG | M.Kpn135LUORF22800P |
| 22805 | S | S.Kpnst65ORF21505P (100% identity) | GAAYNNNNNNNCTGG | S.Kpn135LUORF22800P |
| 22810 | endoribonuclease SymE | |||
| 23125 | S | S.Ksp4251ORF22010P (100% identity) | CGANNNNNNNNTGCC | S.Kpn135LUORF23130P |
| 23130 | M | M.Ksp4251ORF22010P (100% identity) | CGANNNNNNNNTGCC | M.Kpn135LUORF23130P |
| 23135 | R | Kpnr99ORF22815P (100% identity) | CGANNNNNNNNTGCC | Kpn135LUORF23130P |
| 23140 | integrase arm-type DNA-binding domain-containing | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1815 | cell division protein DamX | |||
| 1820 | M | M.KspC31DamP (100% identity) | GATC | M.Kpn135LUDamP |
| 1825 | ribulose-phosphate 3-epimerase | |||
| 9180 | phosphohydrolase | |||
| 9185 | M | M.Kpntgc02DcmP (100% identity) | CCWGG | M.Kpn135LUDcmP |
| 9190 | V | V.Ksp2N3ORFEP (75% identity) | CCWGG | V.Kpn135LUDcmP |
| 9195 | drug/metabolite exporter YedA | |||
| 19665 | regulator | |||
| 19670 | M | M2.Kpni392wORF2000P (100% identity) | GATC | M1.Kpn135LUORF19670P |
| 19675 | M | M1.Kpni392wORF2000P (100% identity) | GATC | M2.Kpn135LUORF19670P |
| 19680 | 72 aa hypothetical protein | |||
| 23020 | HNH endonuclease | |||
| 23025 | R | Ksp4251ORF21915P (100% identity) | Kpn135LUORF23025P | |
| 23030 | type VI secretion system tube protein Hcp | |||
| plasmid pKP-135LU_HIB-FIB | ||||
| 27765 | 109 aa hypothetical protein | |||
| 27770 | M | M.KquBL06ORF12450P (100% identity) | M.Kpn135LUORF27770P | |
| 27775 | R | Ksp6FORF29980P (100% identity) | CCWGG | Kpn135LUORF27770P |
| 27780 | 82 aa hypothetical protein | |||
| 27870 | 81 aa hypothetical protein | |||
| 27875 | M | M.KquBL06ORF12610P (100% identity) | M.Kpn135LUORF27875P | |
| 27880 | 1126 aa hypothetical protein | |||
| plasmid pKP-135LU_R | ||||
| 28690 | 76 aa hypothetical protein | |||
| 28695 | M | M.SmaBWH35ORF25885P (100% identity) | M.Kpn135LUORF28695P | |
| 28700 | 73 aa hypothetical protein | |||
| plasmid pvB_Kpn_135LU_ST147 | ||||
| 28370 | 75 aa hypothetical protein | |||
| 28375 | M | M.Rpl13095ORF6118P (100% identity) | GATC | M.Kpn135LUORF28375P |
| 28380 | 277 aa hypothetical protein | |||