Klebsiella quasipneumoniae SWHEFF_72 |
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Putative Klebsiella quasipneumoniae SWHEFF_72 RM systems
Ref: Che,Y. et al. Microbiome 10 (1), 16 (2022)
REBASE ref # 33791
| Sequence length: | GenBank #: | |
| Chromosome: | 5,362,660 bp | CP055010 |
| plasmid unnamed1: | 274,085 bp | CP055011 |
| plasmid unnamed2: | 234,910 bp | CP055012 |
| plasmid unnamed3: | 167,218 bp | CP055013 |
REBASE acronym: KpnFF72
Org_num: 55412
All begin HUZ79_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| plasmid unnamed2 | ||||
| 28285 | cation-transporting P-type ATPase | |||
| 28290 | M | M1.KquBL05ORF31400P (99% identity) | M.KpnFF72ORF28290P | |
| 28295 | AAA family ATPase | |||
| 28300 | S | S2.KquBL05ORF31400P (100% identity) | S.KpnFF72ORF28290P | |
| 28305 | DNA binding domain-containing protein | |||
| 28310 | histidinol-phosphatase | |||
| 28315 | R | PaeCF13ORF2175P (100% identity) | KpnFF72ORF28290P | |
| 28320 | helix-turn-helix domain-containing protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1795 | cell division protein DamX | |||
| 1800 | M | M.KvaHKUDamP (100% identity) | GATC | M.KpnFF72DamP |
| 1805 | ribulose-phosphate 3-epimerase | |||
| 8860 | phosphohydrolase | |||
| 8865 | M | M.Kqu21223ORF8550P (100% identity) | CCWGG | M.KpnFF72ORF8865P |
| 8870 | V | V.KquFF28ORF8370P (100% identity) | V.KpnFF72ORF8865P | |
| 8875 | drug/metabolite exporter YedA | |||
| 13695 | 199 aa hypothetical protein | |||
| 13700 | M | M.Kpn142ORF4290P (98% identity) | M.KpnFF72ORF13700P | |
| 13705 | dcm methylase | |||
| 15585 | replication endonuclease | |||
| 15590 | M | M.Kpn1301ORFAP (99% identity) | M.KpnFF72ORF15590P | |
| 15595 | 3-5 exoribonuclease | |||
| 19750 | YqaJ viral recombinase family protein | |||
| 19755 | M | M.Kpns66ORF7190P (99% identity) | M.KpnFF72ORF19755P | |
| 19760 | dcm methylase | |||
| 23045 | glycoside hydrolase family 43 protein | |||
| 23050 | R | KquPF26ORF22440P (99% identity) | KpnFF72ORF23050P | |
| 23055 | RelA/SpoT domain-containing protein | |||
| plasmid unnamed1 | ||||
| 27470 | DNA replication protein DnaC | |||
| 27475 | M | M.Ksp1927ORF27750P (100% identity) | M.KpnFF72ORF27475P | |
| 27480 | R | Sen20597ORF9325P (100% identity) | CCWGG | KpnFF72ORF27475P |
| 27485 | 82 aa hypothetical protein | |||
| 27550 | 168 aa hypothetical protein | |||
| 27555 | M | M.SflN92ORF24190P (100% identity) | M.KpnFF72ORF27555P | |
| 27560 | 1126 aa hypothetical protein | |||
| plasmid unnamed2 | ||||
| 28110 | 100 aa hypothetical protein | |||
| 28115 | M | M.Sen1271ORF23350P (100% identity) | M.KpnFF72ORF28115P | |
| 28120 | 143 aa hypothetical protein | |||
| plasmid unnamed3 | ||||
| 29440 | 76 aa hypothetical protein | |||
| 29445 | M | M.SmaQC11ORF52800P (100% identity) | M.KpnFF72ORF29445P | |
| 29450 | 73 aa hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 8740 | prepilin-type N-terminal cleavage/methylation | |||
| 8745 | R | Eco21EVAORFEP (99% identity) | CCGAG | KpnFF72ORF8750P |
| 8750 | M | M.KpnYI2ORF1833P (100% identity) | CCGAG | M.KpnFF72ORF8750P |
| 8755 | SpnT protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| plasmid unnamed3 | ||||
| 29305 | IS5 family transposase | |||
| 29310 | R | RorCRE01McrC2P (100% identity) | KpnFF72McrCP | |
| 29315 | R | Rte104AMcrBP (100% identity) | KpnFF72McrBP | |
| 29320 | IS3-like element ISKpn38 family transposase | |||