Salmonella enterica subsp. enterica serovar Indiana 15 |
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Putative Salmonella enterica subsp. enterica serovar Indiana 15 RM systems
Ref: Chao,G. and Wang,X. unpublished
REBASE ref # 33772
| Sequence length: | GenBank #: | |
| Chromosome: | 4,740,845 bp | CP092258 |
| plasmid unnamed1: | 214,299 bp | CP092259 |
REBASE acronym: SenI15
Org_num: 55243
All begin MF259_
| Type II | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1750 | cell division protein DamX | |||
| 1755 | M | M.StyTDamP (100% identity) | GATC | M.SenI15DamP |
| 1760 | ribulose-phosphate 3-epimerase | |||
| 2890 | malate transporter | |||
| 2895 | R | SenV2ORF20065P (100% identity) | SenI15ORF2895P | |
| 2900 | TnsA endonuclease N-terminal domain-containing | |||
| 2935 | DUF2220 domain-containing protein | |||
| 2940 | R | Sensp14178ORF19855P (100% identity) | SenI15ORF2940P | |
| 2945 | YebC/PmpR family DNA-binding transcriptional | |||
| 5125 | 74 aa hypothetical protein | |||
| 5130 | M | M.Sensp14152ORF18590P (100% identity) | M.SenI15ORF5130P | |
| 5135 | DUF1317 domain-containing protein | |||
| 13460 | drug/metabolite exporter YedA | |||
| 13465 | V | V.Sensp14178DcmP (100% identity) | CCWGG | V.SenI15DcmP |
| 13470 | M | M.SspZ54DcmP (100% identity) | CCWGG | M.SenI15DcmP |
| 13475 | phosphohydrolase | |||
| 19590 | replication endonuclease | |||
| 19595 | M | M.SspZ54ORF6040P (100% identity) | GATC | M.SenI15ORF19595P |
| 19600 | DUF3850 domain-containing protein | |||
| 20505 | DNA-binding transcriptional regulator Fis | |||
| 20510 | M | M.Sensp14178ORF2230P (100% identity) | ATGCAT | M.SenI15ORF20510P |
| 20515 | DUF2556 family protein | |||
| plasmid unnamed1 | ||||
| 23480 | 55 aa hypothetical protein | |||
| 23485 | M | M.YpsF1ORFCP (100% identity) | CCWGG | M.SenI15ORF23485P |
| 23490 | thermonuclease family protein | |||
| 24090 | DNA-binding protein | |||
| 24095 | M | M.YpsF1ORFDP (100% identity) | GATC | M.SenI15ORF24095P |
| 24100 | 277 aa hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 2845 | integrase arm-type DNA-binding domain-containing | |||
| 2850 | R | Sensp14178ORF19930P (100% identity) | CGGAAC | SenI15ORF2855P |
| 2855 | M | M.Sensp14178ORF19930P (100% identity) | CGGAAC | M.SenI15ORF2855P |
| 2860 | S8 family peptidase | |||
| 5545 | MFS transporter | |||
| 5550 | M | M.Sensp14178ORF17290P (100% identity) | CAGAG | M.SenI15ORF5550P |
| 5555 | R | Sensp14154ORF17330P (100% identity) | CAGAG | SenI15ORF5550P |
| 5560 | small effector SsaA | |||