Shewanella denitrificans OS217 |
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Putative Shewanella denitrificans OS217 RM systems
Ref: Copeland,A. et al. unpublished
REBASE ref # 9704
Complete sequence: 4,545,906 bp
GenBank #: CP000302 (NC_007954)
REBASE acronym: SdeOS
Org_num: 4297
All begin Sden_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 1233 | alkylphosphonate utilization operon protein | |||
| 1234 | R | Sba10735ORF2181P (87% identity) | SdeOSORF1235P | |
| 1235 | M | M.SalH1ORFBP (90% identity) | M.SdeOSORF1235P | |
| 1236 | protein of unknown function DUF1016 | |||
| 1237 | S | S.PspDL6ORF11075P (57% identity) | S.SdeOSORF1235P | |
| 1238 | phospholipase D/Transphosphatidylase | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 263 | Sporulation related | |||
| 264 | M | M.SdoLT17ORFBP (83% identity) | GATC | M.SdeOSORF264P |
| 265 | 60 aa conserved hypothetical protein | |||
| 307 | HipA-like protein | |||
| 308 | RM | Psp2262ORF25345P (51% identity) | GAGGAG | SdeOSORF309P |
| 309 | M | M2.Vca204ORF4220P (46% identity) | GAGGAG | M1.SdeOSORF309P |
| 310 | M | M1.PaeIMP68ORF3045P (60% identity) | GAGGAG | M2.SdeOSORF309P |
| 311 | 205 aa hypothetical protein | |||
| 3268 | transciptional regulator | |||
| 3269 | RM | Vpe19642ORFCP (90% identity) | GACNNNNRTGA | SdeOSI |
| 3270 | S | S.Sba223ORF4395P (56% identity) | GACNNNNRTGA | S.SdeOSI |
| 3271 | 283 aa hypothetical protein | |||