Prevotella species E1-a |
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Putative Prevotella species E1-a RM systems
Ref: Accetto,T. and Johnston,C.D. unpublished
REBASE ref # 33669
Complete sequence: 3,567,653 bp
GenBank #: CP091793
REBASE acronym: PspE1a
Org_num: 54875
All begin L6473_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 6535 | Fic family protein | |||
| 6540 | M | M.PspE19ORF6535P (100% identity) | M.PspE1aORF6540P | |
| 6545 | S | S.PspE19ORF6535P (100% identity) | S.PspE1aORF6540P | |
| 6550 | 551 aa hypothetical protein | |||
| 6555 | R | PspE19ORF6535P (100% identity) | PspE1aORF6540P | |
| 6560 | phosphoglycerate kinase | |||
| 11415 | 84 aa hypothetical protein | |||
| 11420 | R | PspE19IIP (100% identity) | GCANNNNNNNNTGCG | PspE1aIIP |
| 11425 | 212 aa hypothetical protein | |||
| 11430 | S | S.PspE225I (100% identity) | GCANNNNNNNNTGCG | S.PspE1aII |
| 11435 | M | M.PspE19II (100% identity) | GCANNNNNNNNTGCG | M.PspE1aII |
| 11440 | DNA-binding protein | |||
| 12270 | DUF1016 N-terminal domain-containing protein | |||
| 12275 | R | PspE19IP (100% identity) | AGGNNNNNTRCC | PspE1aIP |
| 12280 | virulence RhuM family protein | |||
| 12285 | DUF4268 domain-containing protein | |||
| 12290 | 289 aa hypothetical protein | |||
| 12295 | TIGR02391 family protein | |||
| 12300 | S | S.PspE19I (100% identity) | AGGNNNNNTRCC | S.PspE1aI |
| 12305 | M | M.PspE19I (100% identity) | AGGNNNNNTRCC | M.PspE1aI |
| 12310 | DUF2971 domain-containing protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 6830 | phospholipase D-like domain-containing protein | |||
| 6835 | RM | PspE19ORF6830P (100% identity) | PspE1aORF6835P | |
| 6840 | 157 aa hypothetical protein | |||
| 7200 | DpnD/PcfM family protein | |||
| 7205 | M | M.PspE19ORF7200P (100% identity) | M.PspE1aORF7205P | |
| 7210 | type II restriction endonuclease | |||
| 7205 | DNA adenine methylase | |||
| 7210 | R | PspE19ORF7210P (100% identity) | PspE1aORF7215P | |
| 7215 | M | M.PspE19ORF7210P (100% identity) | M.PspE1aORF7215P | |
| 7220 | 343 aa hypothetical protein | |||
| 8740 | DUF4406 domain-containing protein | |||
| 8745 | M | M.PspE19ORF8735P (100% identity) | M.PspE1aORF8745P | |
| 8750 | 105 aa hypothetical protein | |||
| 8760 | 79 aa hypothetical protein | |||
| 8765 | M | M.PspE19ORF8760P (100% identity) | M.PspE1aORF8765P | |
| 8770 | 188 aa hypothetical protein | |||
| 10460 | DUF3578 domain-containing protein | |||
| 10465 | M | M.PspE19ORF10460P (100% identity) | M.PspE1aORF10465P | |
| 10470 | DUF6339 family protein | |||
| 14655 | 265 aa hypothetical protein | |||
| 14660 | R | PspE19ORF14655P (100% identity) | PspE1aORF14665P | |
| 14665 | M | M.PspE19ORF14655P (100% identity) | M.PspE1aORF14665P | |
| 5 | 360 aa hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 4365 | 118 aa hypothetical protein | |||
| 4370 | M | M.PspE19ORF4370P (100% identity) | M.PspE1aORF4370P | |
| 4375 | R | PspE19ORF4370P (100% identity) | PspE1aORF4370P | |
| 4380 | 87 aa hypothetical protein | |||
| 10065 | DEAD/DEAH box helicase family protein | |||
| 10070 | M | M.PspE19ORF10065P (100% identity) | M.PspE1aORF10070P | |
| 10075 | 177 aa hypothetical protein | |||