Prevotella species E13-1 |
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Putative Prevotella species E13-1 RM systems
Ref: Accetto,T. and Johnston,C.D. unpublished
REBASE ref # 33669
Complete sequence: 3,559,363 bp
GenBank #: CP091803
REBASE acronym: PspE131
Org_num: 54876
All begin L6464_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 9945 | DUF1016 N-terminal domain-containing protein | |||
| 9950 | R | PspE1514IIP (100% identity) | AGGNNNNRTAC | PspE131IIP |
| 9955 | virulence RhuM family protein | |||
| 9960 | DUF4268 domain-containing protein | |||
| 9965 | DUF3800 domain-containing protein | |||
| 9970 | S | S.PspE1514II (100% identity) | AGGNNNNRTAC | S.PspE131II |
| 9975 | M | M.PspE1514II (100% identity) | AGGNNNNRTAC | M.PspE131II |
| 9980 | DUF2971 domain-containing protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 4575 | Fic family protein | |||
| 4580 | RM | PspE1514ORF7895AP (100% identity) | PspE131ORF4580AP | |
| 4585 | RM | PspE1514ORF7895BP (100% identity) | PspE131ORF4580BP | |
| 4590 | 92 aa hypothetical protein | |||
| 5270 | DpnD/PcfM family protein | |||
| 5275 | M | M.PspE1514ORF7205P (100% identity) | M.PspE131ORF5275P | |
| 5280 | type II restriction endonuclease | |||
| 5275 | DNA adenine methylase | |||
| 5280 | R | PspE1514ORF7195P (100% identity) | PspE131ORF5285P | |
| 5285 | M | M.PspE1514ORF7195P (100% identity) | M.PspE131ORF5285P | |
| 5290 | 260 aa hypothetical protein | |||
| 7525 | HIRAN domain-containing protein | |||
| 7530 | V | V.PspE1514ORF4935P (100% identity) | V.PspE131ORF7545P | |
| 7535 | 223 aa hypothetical protein | |||
| 7540 | HpaII family restriction endonuclease | |||
| 7545 | M | M.PspE1514ORF4935P (100% identity) | M.PspE131ORF7545P | |
| 7550 | 180 aa hypothetical protein | |||
| 7920 | thioredoxin-dependent thiol peroxidase | |||
| 7925 | V | V.PspE1514ORF4535P (100% identity) | V.PspE131ORF7940P | |
| 7930 | restriction endonuclease | |||
| 7935 | R | PspE1514ORF4535P (100% identity) | PspE131ORF7940P | |
| 7940 | M | M2.PspE1514ORF4535P (100% identity) | M1.PspE131ORF7940P | |
| 7945 | M | M1.PspE1514ORF4535P (100% identity) | M2.PspE131ORF7940P | |
| 7950 | Y-family DNA polymerase | |||
| 8445 | 123 aa hypothetical protein | |||
| 8450 | R | PspE1514ORF4020P (100% identity) | PspE131ORF8455P | |
| 8455 | M | M2.PspE1514ORF4020P (100% identity) | M1.PspE131ORF8455P | |
| 8460 | M | M2.PspE225ORF10090P (100% identity) | M2.PspE131ORF8455P | |
| 8465 | 151 aa hypothetical protein | |||
| 12445 | 265 aa hypothetical protein | |||
| 12450 | R | PspE1aORF14665P (100% identity) | PspE131ORF12455P | |
| 12455 | M | M.PspE1aORF14665P (100% identity) | M.PspE131ORF12455P | |
| 12460 | 360 aa hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 2765 | 118 aa hypothetical protein | |||
| 2770 | M | M.PspE1aORF4370P (100% identity) | M.PspE131ORF2770P | |
| 2775 | R | PspE1aORF4370P (100% identity) | PspE131ORF2770P | |
| 2780 | IS110 family transposase | |||
| 4865 | DEAD/DEAH box helicase | |||
| 4870 | M | M.PspE1514ORF7610P (100% identity) | M.PspE131ORF4870P | |
| 4875 | R | PspE1514ORF7610P (100% identity) | PspE131ORF4870P | |
| 4880 | helix-turn-helix transcriptional regulator | |||