Prevotella species E9-3 |
| [index] - [schematics] - [save as Word doc] |
|
|
|
Putative Prevotella species E9-3 RM systems
Ref: Accetto,T. and Johnston,C.D. unpublished
REBASE ref # 33669
Complete sequence: 3,733,400 bp
GenBank #: CP091786
REBASE acronym: PspE93
Org_num: 54882
All begin L6475_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 13340 | glycoside hydrolase family 78 protein | |||
| 13345 | R | PspE228ORF2950P (84% identity) | GCAYNNNNNNAGT | PspE93IP |
| 13350 | type II toxin-antitoxin system RelE/ParE family | |||
| 13355 | 82 aa hypothetical protein | |||
| 13360 | S | S.BtrY31ORF6670P (33% identity) | GCAYNNNNNNAGT | S.PspE93I |
| 13365 | M | M.PspE228ORF2950P (89% identity) | GCAYNNNNNNAGT | M.PspE93I |
| 13370 | Fic family protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 4535 | DNA/RNA non-specific endonuclease | |||
| 4540 | RM | Fpr3ORF23770P (40% identity) | PspE93ORF4540AP | |
| 4545 | Txe/YoeB family addiction module toxin | |||
| 4550 | 82 aa hypothetical protein | |||
| 4555 | RM | Esp05ORF272P (43% identity) | PspE93ORF4540BP | |
| 4560 | CotH kinase family protein | |||
| 7200 | ATP-binding protein | |||
| 7205 | RM | PjeF0106ORF6380P (55% identity) | PspE93ORF7205P | |
| 7210 | DEAD/DEAH box helicase family protein | |||
| 11760 | HNH endonuclease | |||
| 11765 | R | PspE228ORF3305P (89% identity) | PspE93ORF11770P | |
| 11770 | M | M.Pme1567ORF5075P (80% identity) | M.PspE93ORF11770P | |
| 11775 | insulinase family protein | |||
| 13000 | 50 aa hypothetical protein | |||
| 13005 | RM | PspRep29ORF7920P (51% identity) | PspE93ORF13005P | |
| 13010 | phospholipase D-like domain-containing protein | |||
| 13510 | restriction endonuclease | |||
| ??? | R | Pbi727ORF8090P (30% identity) | PspE93ORF13520P | |
| 13520 | M | M.Pbi727ORF3720P (73% identity) | M.PspE93ORF13520P | |
| 13525 | Vat family streptogramin A O-acetyltransferase | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 2780 | 170 aa hypothetical protein | |||
| 2785 | M | M.PruKHP1ORF7920P (56% identity) | VGACAT | M.PspE93III |
| 2790 | R | PruKHP1ORF7920P (88% identity) | VGACAT | PspE93IIIP |
| 2795 | 449 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 825 | restriction endonuclease subunit S | |||
| ??? | R | Bxy111McrBP (68% identity) | PspE93McrBP | |
| 835 | McrC family protein | |||
| ??? | 5-methylcytosine-specific restriction enzyme B | |||
| 835 | R | Bxy111McrCP (56% identity) | PspE93McrCP | |
| 840 | type I restriction endonuclease subunit R | |||
| 8400 | 256 aa hypothetical protein | |||
| 8405 | R | PspE133ORF10090P (93% identity) | PspE93ORF8405P | |
| 8410 | RecQ family ATP-dependent DNA helicase | |||