Escherichia coli SWYH.B349aT |
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Putative Escherichia coli SWYH.B349aT RM systems
Ref: Hui,S.W. et al. unpublished
REBASE ref # 33410
Complete sequence: 4,800,990 bp
GenBank #: CP091773
REBASE acronym: EcoB349aT
Org_num: 53932
All begin L6V99_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 5775 | IS1 family transposase | |||
| 5780 | R | Sen12509ORF5865P (100% identity) | ACAYNNNNCTG | EcoB349aTORF5790P |
| 5785 | S | S.Sen12509ORF5865P (100% identity) | ACAYNNNNCTG | S.EcoB349aTORF5790P |
| 5790 | M | M.SenS688ORF13495P (100% identity) | ACAYNNNNCTG | M.EcoB349aTORF5790P |
| 5795 | integrase core domain-containing protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 2420 | DUF2556 family protein | |||
| 2425 | M | M.Ssp28760ORF20045P (100% identity) | ATGCAT | M.EcoB349aTORF2425P |
| 2430 | DNA-binding transcriptional regulator Fis | |||
| 9455 | HD domain-containing protein | |||
| 9460 | M | M.SflN107DcmP (100% identity) | CCWGG | M.EcoB349aTDcmP |
| 9465 | V | V.SflN107DcmP (100% identity) | V.EcoB349aTDcmP | |
| 9470 | drug/metabolite exporter YedA | |||
| 18100 | LexA family transcriptional regulator | |||
| 18105 | M | M.Sbo4868ORF10650P (100% identity) | GATC | M.EcoB349aTORF18105P |
| 18110 | PerC family transcriptional regulator | |||
| 21485 | phage lysis protein EssD | |||
| 21490 | M | M.Sso63633ORF22290P (100% identity) | M.EcoB349aTORF21490P | |
| 21495 | TrmB family transcriptional regulator | |||
| 21530 | LexA family transcriptional regulator | |||
| 21535 | M | M.Sso90ORF15820P (100% identity) | GATC | M.EcoB349aTORF21535P |
| 21540 | PerC family transcriptional regulator | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 13440 | isocitrate/isopropylmalate family dehydrogenase | |||
| 13445 | R | EmaE2C08McrCP (100% identity) | EcoB349aTMcrCP | |
| 13450 | R | EcoteDMcrBP (100% identity) | EcoB349aTMcrBP | |
| 13455 | recombinase family protein | |||
| Orphan M | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 15000 | replication endonuclease | |||
| 15005 | M | M.Sen663ORF16605P (100% identity) | GATC | M.EcoB349aTORF15005P |
| 15010 | TraR/DksA family transcriptional regulator | |||