Actinobacillus pleuropneumoniae serovar 6 Femo |
| [index] - [schematics] - [save as Word doc] |
|
|
|
Putative Actinobacillus pleuropneumoniae serovar 6 Femo RM systems
Ref: Dona,V. and Perreten,V. unpublished
REBASE ref # 26522
Complete sequence: 2,409,565 bp
GenBank #: CP069796
REBASE acronym: AplFem
Org_num: 53323
All begin D1099_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 1500 | DNA topoisomerase (ATP-hydrolyzing) subunit A | |||
| 1505 | M | M.Apl6ORF956P (96% identity) | AAAYNNNNNNCTC | M.AplFemORF1505P |
| 1510 | virulence RhuM family protein | |||
| 1515 | Abi family protein | |||
| 1520 | S | S.Apl6ORF956P (100% identity) | AAAYNNNNNNCTC | S.AplFemORF1505P |
| 1525 | anticodon nuclease | |||
| 1530 | R | Apl6ORF956P (100% identity) | AAAYNNNNNNCTC | AplFemORF1505P |
| 1535 | ABC transporter ATP-binding protein | |||
| 8475 | bifunctional glutamate--cysteine ligase | |||
| 8480 | S | S1.Apl11407ORF2338P (100% identity) | S2.AplFemORF8500P | |
| 8485 | tyrosine-type recombinase/integrase | |||
| 8490 | S | S2.Apl11407ORF2338P (100% identity) | S1.AplFemORF8500P | |
| 8495 | virulence RhuM family protein | |||
| 8500 | M | M.AplS4074ORF8040P (100% identity) | M.AplFemORF8500P | |
| 8505 | R | Apl6ORF2000P (100% identity) | AplFemORF8500P | |
| 8510 | phosphatidylserine decarboxylase | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 995 | sodium-dependent transporter | |||
| 1000 | M | M.AplS4074ORF995P (100% identity) | GATC | M.AplFemORF1000P |
| 1005 | 3-dehydroquinate synthase | |||
| 2740 | AAA family ATPase | |||
| 2745 | M | M.AplFemORF3055P (100% identity) | M.AplFemORF2745P | |
| 2750 | DUF1367 family protein | |||
| 3050 | AAA family ATPase | |||
| 3055 | M | M.AplFemORF2745P (100% identity) | M.AplFemORF3055P | |
| 3060 | DUF1367 family protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 2790 | DUF2570 family protein | |||
| 2795 | M | M.AplFemORF3105P (100% identity) | M.AplFemORF2795P | |
| 2800 | terminase small subunit | |||
| 3100 | DUF2570 family protein | |||
| 3105 | M | M.AplFemORF2795P (100% identity) | M.AplFemORF3105P | |
| 3110 | terminase small subunit | |||
| 4755 | 30S ribosomal protein S12 methylthiotransferase | |||
| 4760 | R | Apl6ORF9060P (100% identity) | AplFemORF4765P | |
| 4765 | M | M.AplP1421ORF3995P (100% identity) | M.AplFemORF4765P | |
| 4770 | tRNA 5-methoxyuridine(34)/uridine 5-oxyacetic | |||