Xanthomonas campestris pv. campestris BJSJQ20200612 |
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Putative Xanthomonas campestris pv. campestris BJSJQ20200612 RM systems
Ref: Zhong,X. unpublished
REBASE ref # 33952
Complete sequence: 5,115,807 bp
GenBank #: CP069085
REBASE acronym: Xca612
Org_num: 56055
All begin JM952_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 6020 | M48 family metallopeptidase | |||
| 6025 | R | XcaXY11ORF6160P (100% identity) | CAAGNNNNNCTTA | Xca612ORF6040P |
| 6030 | S | S2.XcaTJORFBP (100% identity) | CAAGNNNNNCTTA | S.Xca612ORF6040P |
| 6035 | damage-inducible protein D | |||
| 6040 | M | M.XcaTJORFBP (100% identity) | CAAGNNNNNCTTA | M.Xca612ORF6040P |
| 6045 | restriction endonuclease subunit S | |||
| 16345 | 98 aa hypothetical protein | |||
| 16350 | R | XcaTJORFEP (89% identity) | Xca612ORF16365P | |
| 16355 | S | S.XcaTJORFEP (74% identity) | S.Xca612ORF16365P | |
| 16360 | virulence RhuM family protein | |||
| 16365 | M | M.XcaTJORFEP (100% identity) | M.Xca612ORF16365P | |
| 16370 | restriction endonuclease | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 2975 | IS3-like element IS1404 family transposase | |||
| 2980 | R | XcaYORFAP (98% identity) | Xca612ORF2980P | |
| 2985 | 90 aa hypothetical protein | |||
| 10535 | AAA family ATPase | |||
| 10540 | M | M.XcaYORFEP (48% identity) | M.Xca612ORF10540P | |
| 10545 | DNA topoisomerase III | |||
| 10595 | IS3-like element IS476 family transposase | |||
| 10600 | RM | XcaSB80ORF10635P (100% identity) | Xca612ORF10600P | |
| 10605 | DEAD/DEAH box helicase | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 16365 | SAM-dependent DNA methyltransferase | |||
| 16370 | R | XcaYMrrP (100% identity) | Xca612Mrr2P | |
| 16375 | type II toxin-antitoxin system RelE/ParE family | |||
| 22130 | RluA family pseudouridine synthase | |||
| 22135 | R | XcaYMrr2P (90% identity) | Xca612MrrP | |
| 22140 | topoisomerase DNA-binding C4 zinc finger | |||