Photobacterium damselae subsp. damselae AS-16-0963-3 |
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Putative Photobacterium damselae subsp. damselae AS-16-0963-3 RM systems
Ref: Baseggio,L. et al. unpublished
REBASE ref # 33663
| Sequence length: | GenBank #: | |
| chromosome 1: | 3,194,425 bp | CP065041 |
| chromosome 2: | 1,382,274 bp | CP065042 |
REBASE acronym: Pda9633
Org_num: 54848
All begin IPQ37_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| chromosome 2 | ||||
| 16600 | ATP-binding protein | |||
| 16605 | S | S.KquA708ORF24885P (65% identity) | S.Pda9633ORF16610P | |
| 16610 | M | M.PaqP87ORF7530P (97% identity) | M.Pda9633ORF16610P | |
| 16615 | R | PaqP87ORF7530P (95% identity) | Pda9633ORF16610P | |
| 16620 | 319 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| chromosome 1 | ||||
| 1015 | AAA family ATPase | |||
| 1020 | M | M.PdaXP11DamP (100% identity) | GATC | M.Pda9633DamP |
| 1025 | DUF2970 domain-containing protein | |||
| 11720 | DNA phosphorothioation-associated putative | |||
| 11725 | M | M.VpaBM24BSspAP (71% identity) | M.Pda9633SspAP | |
| 11730 | 150 aa hypothetical protein | |||
| 11735 | AAA family ATPase | |||
| 11740 | 78 aa hypothetical protein | |||
| 11745 | DEAD/DEAH box helicase family protein | |||
| 11750 | DUF262 domain-containing protein | |||
| 11755 | M | M.VcyFF75SspBP (73% identity) | M.Pda9633SspBP | |
| 11760 | M | M.VspJC009SspCP (56% identity) | M.Pda9633SspCP | |
| 11765 | M | M.VbrSspDP (85% identity) | M.Pda9633SspDP | |
| 11770 | sporulation protein | |||
| chromosome 2 | ||||
| 16650 | iron-containing alcohol dehydrogenase | |||
| 16655 | M | M.Pda906ORF14645P (99% identity) | M.Pda9633ORF16655P | |
| 16660 | 291 aa hypothetical protein | |||
| 20050 | R | Vha21FLORF24295P (94% identity) | Pda9633ORF20055P | |
| 20055 | M | M.Vha21FLORF24295P (92% identity) | M.Pda9633ORF20055P | |
| 20060 | HNH endonuclease | |||
| 20220 | HD domain-containing protein | |||
| 20225 | M | M.PdaRM71ORF16080P (99% identity) | M.Pda9633ORF20225P | |
| 20230 | alpha/beta fold hydrolase | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| chromosome 2 | ||||
| 16055 | (deoxy)nucleoside triphosphate | |||
| 16060 | R | Pda904681McrCP (89% identity) | Pda9633McrCP | |
| 16065 | R | Pdaa311McrBP (98% identity) | Pda9633McrBP | |
| 16070 | 188 aa hypothetical protein | |||