Vibrio parahaemolyticus VP17 |
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Putative Vibrio parahaemolyticus VP17 RM systems
Ref: Fu,S. unpublished
REBASE ref # 33935
| Sequence length: | GenBank #: | |
| chromosome I: | 3,567,562 bp | CP068633 |
| chromosome II: | 1,863,898 bp | CP068634 |
| plasmid pVP17-1: | 70,247 bp | CP068635 |
REBASE acronym: VpaVP17
Org_num: 56013
All begin JHT19_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| chromosome I | ||||
| 1930 | 331 aa hypothetical protein | |||
| 1935 | S | S.Vpa1937ORFEP (100% identity) | S.VpaVP17ORF1940P | |
| 1940 | M | M.Vpa1937ORFEP (100% identity) | M.VpaVP17ORF1940P | |
| 1945 | 132 aa hypothetical protein | |||
| 1950 | 49 aa hypothetical protein | |||
| 1955 | elongation factor Ts | |||
| 1960 | site-specific DNA-methyltransferase | |||
| 1965 | Abi family protein | |||
| 1970 | R | Vpa1937ORFEP (98% identity) | VpaVP17ORF1940P | |
| 1975 | MarR family transcriptional regulator | |||
| 8975 | 145 aa hypothetical protein | |||
| 8980 | R | Vpa1937ORFDP (100% identity) | VpaVP17ORF9005P | |
| 8985 | S | S2.ValSP1ORF17270P (98% identity) | S2.VpaVP17ORF9005P | |
| 8990 | 70 aa hypothetical protein | |||
| 8995 | FRG domain-containing protein | |||
| 9000 | S | S2.Vpa1937ORFDP (100% identity) | S1.VpaVP17ORF9005P | |
| 9005 | M | M.Vpa1937ORFDP (100% identity) | M.VpaVP17ORF9005P | |
| 9010 | 263 aa hypothetical protein | |||
| 14045 | nicotinamide-nucleotide amidase | |||
| 14050 | M | M.VpaG855ORF1285P (100% identity) | M.VpaVP17ORF14050P | |
| 14055 | AAA family ATPase | |||
| 14060 | S | S.VpaG855ORF1285P (51% identity) | S1.VpaVP17ORF14050P | |
| 14065 | S | S.Vpa1937ORFCP (39% identity) | S2.VpaVP17ORF14050P | |
| 14070 | IS3 family transposase | |||
| 14075 | R | Vpa1937ORFCP (100% identity) | VpaVP17ORF14050P | |
| 14080 | DUF2787 domain-containing protein | |||
| chromosome II | ||||
| 22830 | 511 aa hypothetical protein | |||
| 22835 | S | S.VpaS2ORFFP (15% identity) | S2.VpaVP17ORF22845P | |
| 22840 | S | S.Vpa1937ORFFP (100% identity) | S1.VpaVP17ORF22845P | |
| 22845 | M | M.Vpa1937ORFFP (98% identity) | M.VpaVP17ORF22845P | |
| 22850 | R | Vpa0051ORF23315P (100% identity) | VpaVP17ORF22845P | |
| 22855 | sigma-54-dependent Fis family transcriptional | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| chromosome I | ||||
| 1955 | elongation factor Ts | |||
| 1960 | M | M.Vpa0051ORF2180P (99% identity) | M.VpaVP17ORF1960P | |
| 1965 | Abi family protein | |||
| 10795 | 90 aa hypothetical protein | |||
| 10800 | M | M.VpaS2ORFEP (91% identity) | M.VpaVP17ORF10800P | |
| 10805 | 102 aa hypothetical protein | |||
| 13370 | BREX-1 system phosphatase PglZ type A | |||
| 13375 | RM | Vpa1937ORFBP (100% identity) | VpaVP17ORF13375P | |
| 13380 | DUF262 domain-containing protein | |||
| plasmid pVP17-1 | ||||
| 25315 | IS5 family transposase | |||
| 25320 | M | M.VpaTW01ORF25925P (100% identity) | M.VpaVP17ORF25320P | |
| 25325 | 496 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| chromosome I | ||||
| 1980 | AlpA family phage regulatory protein | |||
| 1985 | R | Vpa1937MrrP (100% identity) | VpaVP17MrrP | |
| 1990 | preprotein translocase subunit SecB | |||