Vibrio parahaemolyticus TJ-187 |
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Putative Vibrio parahaemolyticus TJ-187 RM systems
Ref: Fu,S. unpublished
REBASE ref # 33935
| Sequence length: | GenBank #: | |
| chromosome I: | 3,354,580 bp | CP068647 |
| chromosome II: | 1,866,453 bp | CP068648 |
REBASE acronym: VpaTJ187
Org_num: 56009
All begin JHS88_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| chromosome I | ||||
| 1810 | 331 aa hypothetical protein | |||
| 1815 | S | S.VpaLH24ORF1820P (100% identity) | S.VpaTJ187ORF1820P | |
| 1820 | M | M.VpaLH24ORF1820P (100% identity) | M.VpaTJ187ORF1820P | |
| 1825 | 132 aa hypothetical protein | |||
| 1830 | 49 aa hypothetical protein | |||
| 1835 | elongation factor Ts | |||
| 1840 | site-specific DNA-methyltransferase | |||
| 1845 | R | VpaLH24ORF1820P (100% identity) | VpaTJ187ORF1820P | |
| 1850 | MarR family transcriptional regulator | |||
| 15200 | 128 aa hypothetical protein | |||
| 15205 | R | VpaLH24ORF15210P (100% identity) | VpaTJ187ORF15220P | |
| 15210 | AAA family ATPase | |||
| 15215 | S | S.VpaLH24ORF15210P (100% identity) | S.VpaTJ187ORF15220P | |
| 15220 | M | M.VpaLH24ORF15210P (100% identity) | M.VpaTJ187ORF15220P | |
| 15225 | 99 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| chromosome I | ||||
| 1835 | elongation factor Ts | |||
| 1840 | M | M.VpaLH24ORF1840P (100% identity) | M.VpaTJ187ORF1840P | |
| 1845 | DEAD/DEAH box helicase family protein | |||
| 10485 | DUF3696 domain-containing protein | |||
| 10490 | R | VpaLH24ORF10490P (100% identity) | VpaTJ187ORF10495P | |
| 10495 | M | M.VpaLH24ORF10490P (100% identity) | M.VpaTJ187ORF10495P | |
| 10500 | tyrosine-type recombinase/integrase | |||
| chromosome II | ||||
| 16245 | 84 aa hypothetical protein | |||
| 16250 | M | M.VpaSM4ORFAP (100% identity) | M.VpaTJ187ORF16250P | |
| 16255 | phage tail tape measure protein | |||
| 22985 | 89 aa hypothetical protein | |||
| 22990 | M | M.VpaS1ORFBP (90% identity) | M.VpaTJ187ORF22990P | |
| 22995 | 759 aa hypothetical protein | |||
| 24180 | 90 aa hypothetical protein | |||
| 24185 | M | M.VpaLH24ORF24170P (100% identity) | M.VpaTJ187ORF24185P | |
| 24190 | 759 aa hypothetical protein | |||