Vibrio parahaemolyticus LH80 |
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Putative Vibrio parahaemolyticus LH80 RM systems
Ref: Fu,S. unpublished
REBASE ref # 33935
| Sequence length: | GenBank #: | |
| chromosome I: | 3,422,475 bp | CP068627 |
| chromosome II: | 1,856,107 bp | CP068628 |
| plasmid pLH80-1: | 83,353 bp | CP068629 |
REBASE acronym: VpaLH80
Org_num: 56008
All begin JHS95_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| chromosome I | ||||
| 11465 | AAA family ATPase | |||
| 11470 | S | S.EhoST90ORF2845P (62% identity) | S.VpaLH80ORF11475P | |
| 11475 | M | M.VchPS4ORF8330P (98% identity) | M.VpaLH80ORF11475P | |
| 11480 | multidrug transporter | |||
| 11485 | R | VpaBAORFAP (99% identity) | VpaLH80ORF11475P | |
| 11490 | DEAD/DEAH box helicase family protein | |||
| 13140 | 613 aa hypothetical protein | |||
| 13145 | M | M.Vna16374I (96% identity) | M.VpaLH80ORF13145P | |
| 13150 | S | S.PkiA14ORF8630P (60% identity) | S.VpaLH80ORF13145P | |
| 13155 | FRG domain-containing protein | |||
| 13160 | R | VnaPWH3aORF19590P (98% identity) | VpaLH80ORF13145P | |
| 13165 | 403 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| chromosome II | ||||
| 23430 | tyrosine-type recombinase/integrase | |||
| 23435 | M | M.Vdi6510MORF18655P (81% identity) | M.VpaLH80ORF23435P | |
| 23440 | ATP-binding protein | |||
| plasmid pLH80-1 | ||||
| 24840 | 80 aa hypothetical protein | |||
| 24845 | M | M.Vpa15094ORF24460P (100% identity) | M.VpaLH80ORF24845P | |
| 24850 | 91 aa hypothetical protein | |||
| 25080 | GNAT family N-acetyltransferase | |||
| 24700 | RM | Vpa0051ORF27285P (100% identity) | VpaLH80ORF24700P | |
| 24705 | DNA repair protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| chromosome II | ||||
| 20000 | 571 aa hypothetical protein | |||
| 20005 | M | M.Vci275681ORFAP (98% identity) | M.VpaLH80ORF20005P | |
| 20010 | R | Vfu6766ORFEP (98% identity) | VpaLH80ORF20005P | |
| 20015 | DUF2913 family protein | |||