Vibrio parahaemolyticus LH24 |
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Putative Vibrio parahaemolyticus LH24 RM systems
Ref: Fu,S. unpublished
REBASE ref # 33935
| Sequence length: | GenBank #: | |
| chromosome I: | 3,354,580 bp | CP068622 |
| chromosome II: | 1,866,453 bp | CP068623 |
| plasmid pLH24-2: | 67,190 bp | CP068625 |
REBASE acronym: VpaLH24
Org_num: 56007
All begin JHS83_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| chromosome I | ||||
| 1810 | 331 aa hypothetical protein | |||
| 1815 | S | S.VpaTJ187ORF1820P (100% identity) | S.VpaLH24ORF1820P | |
| 1820 | M | M.VpaTJ187ORF1820P (100% identity) | M.VpaLH24ORF1820P | |
| 1825 | 132 aa hypothetical protein | |||
| 1830 | 49 aa hypothetical protein | |||
| 1835 | elongation factor Ts | |||
| 1840 | site-specific DNA-methyltransferase | |||
| 1845 | R | VpaTJ187ORF1820P (100% identity) | VpaLH24ORF1820P | |
| 1850 | MarR family transcriptional regulator | |||
| 15190 | 128 aa hypothetical protein | |||
| 15195 | R | VpaTJ187ORF15220P (100% identity) | VpaLH24ORF15210P | |
| 15200 | AAA family ATPase | |||
| 15205 | S | S.VpaTJ187ORF15220P (100% identity) | S.VpaLH24ORF15210P | |
| 15210 | M | M.VpaTJ187ORF15220P (100% identity) | M.VpaLH24ORF15210P | |
| 15215 | 99 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| chromosome I | ||||
| 1835 | elongation factor Ts | |||
| 1840 | M | M.VpaTJ187ORF1840P (100% identity) | M.VpaLH24ORF1840P | |
| 1845 | DEAD/DEAH box helicase family protein | |||
| 10480 | DUF3696 domain-containing protein | |||
| 10485 | R | VpaTJ187ORF10495P (100% identity) | VpaLH24ORF10490P | |
| 10490 | M | M.VpaTJ187ORF10495P (100% identity) | M.VpaLH24ORF10490P | |
| 10495 | tyrosine-type recombinase/integrase | |||
| chromosome II | ||||
| 16235 | 84 aa hypothetical protein | |||
| 16240 | M | M.VpaTJ187ORF16250P (100% identity) | M.VpaLH24ORF16240P | |
| 16245 | phage tail tape measure protein | |||
| 22970 | 89 aa hypothetical protein | |||
| 22975 | M | M.VpaTJ187ORF22990P (100% identity) | M.VpaLH24ORF22975P | |
| 22980 | 759 aa hypothetical protein | |||
| 24165 | 90 aa hypothetical protein | |||
| 24170 | M | M.VpaTJ187ORF24185P (100% identity) | M.VpaLH24ORF24170P | |
| 24175 | 759 aa hypothetical protein | |||
| plasmid pLH24-2 | ||||
| 24820 | 496 aa hypothetical protein | |||
| 24825 | M | M.VpaVP17ORF25320P (100% identity) | M.VpaLH24ORF24825P | |
| 24830 | IS5 family transposase | |||