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Putative Rhodanobacter denitrificans FW104-MT042 RM systems
Ref: Zhou,A. and Zhou,J. unpublished
REBASE ref # 33737
Sequence length: | GenBank #: | |
Chromosome: | 3,974,980 bp | CP088925 |
plasmid unnamed: | 261,808 bp | CP088926 |
REBASE acronym: RdeMT042
Org_num: 55091
All begin LRK55_
Type I | ||||
---|---|---|---|---|
ORF | Gene | Most similar | Specificity | Name |
Chromosome | ||||
320 | 164 aa hypothetical protein | |||
325 | R | RdePBS1ORF5950P (100% identity) | RdeMT042ORF340P | |
330 | 203 aa hypothetical protein | |||
335 | S | S.RdeR2ORF1482P (100% identity) | S.RdeMT042ORF340P | |
340 | M | M.RdeR2ORF1482P (100% identity) | M.RdeMT042ORF340P | |
345 | restriction endonuclease | |||
Type II | ||||
ORF | Gene | Most similar | Specificity | Name |
Chromosome | ||||
8860 | RNA pyrophosphohydrolase | |||
8870 | R | RthC33ORFFP (99% identity) | RdeMT042ORF8875P | |
8875 | M | M.RthC33ORFFP (100% identity) | M.RdeMT042ORF8875P | |
8880 | IS3 family transposase | |||
9030 | 420 aa hypothetical protein | |||
9035 | M | M.RthC33ORFGP (99% identity) | M.RdeMT042ORF9035P | |
9040 | V | V.RthC33ORFGP (57% identity) | V.RdeMT042ORF9035P | |
9045 | IS3 family transposase | |||
16075 | AAA family ATPase | |||
16080 | M | M.RdeR5ORF10390P (100% identity) | M.RdeMT042ORF16080P | |
16085 | 181 aa hypothetical protein | |||
17365 | EamA family transporter | |||
17370 | R | RdeR5ORF9560P (99% identity) | RdeMT042ORF17375P | |
17375 | M | M.RdeR5ORF9560P (99% identity) | M.RdeMT042ORF17375P | |
17380 | glycosyltransferase | |||
plasmid unnamed | ||||
19180 | hemerythrin domain-containing protein | |||
19185 | RM | Xtr730ORF4915P (67% identity) | RdeMT042ORF19185P | |
19190 | 419 aa hypothetical protein | |||
19395 | 231 aa hypothetical protein | |||
19400 | M | M.RthR12ORF18970P (81% identity) | M.RdeMT042ORF19400P | |
19405 | RES family NAD+ phosphorylase | |||
Type III | ||||
ORF | Gene | Most similar | Specificity | Name |
Chromosome | ||||
2590 | ComF family protein | |||
2595 | M | M.Rsp24678ORF7981P (71% identity) | M.RdeMT042ORF2595P | |
2600 | R | Rsp24678ORF7981P (99% identity) | RdeMT042ORF2595P | |
2605 | NERD domain-containing protein | |||
5040 | 148 aa hypothetical protein | |||
5045 | M | M.Rsp24678ORF8833P (76% identity) | M.RdeMT042ORF5045P | |
5050 | HigA family addiction module antitoxin | |||
5055 | type II toxin-antitoxin system RelE/ParE family | |||
5060 | R | Rsp24678ORF8833P (99% identity) | RdeMT042ORF5045P | |
5065 | APC family permease | |||
9510 | efflux RND transporter permease subunit | |||
9515 | R | CspSK3ORF65P (73% identity) | RdeMT042ORF9525P | |
9520 | Fic family protein | |||
9525 | M | M.Rsp115ORF18797P (82% identity) | M.RdeMT042ORF9525P | |
9530 | AAA family ATPase |