Rhodanobacter denitrificans FW104-R5 |
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Putative Rhodanobacter denitrificans FW104-R5 RM systems
Ref: Zhou,A. and Zhou,J. unpublished
REBASE ref # 33737
| Sequence length: | GenBank #: | |
| Chromosome: | 3,929,662 bp | CP088980 |
| plasmid unnamed: | 205,087 bp | CP088981 |
REBASE acronym: RdeR5
Org_num: 55093
All begin LRK52_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 16230 | glycerophosphodiester phosphodiesterase | |||
| 16235 | R | RdeR3ORF16165P (100% identity) | RdeR5ORF16255P | |
| 16240 | HigA family addiction module antitoxin | |||
| 16245 | type II toxin-antitoxin system RelE/ParE family | |||
| 16250 | S | S.RdeR3ORF16165P (100% identity) | S.RdeR5ORF16255P | |
| 16255 | M | M.RdeR3ORF16165P (100% identity) | M.RdeR5ORF16255P | |
| 16265 | M61 family metallopeptidase | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 9555 | glycosyltransferase | |||
| 9560 | M | M.RdeR3ORF9480P (100% identity) | M.RdeR5ORF9560P | |
| 9565 | R | RdeR3ORF9480P (100% identity) | CTCGAG | RdeR5ORF9560P |
| 9570 | EamA family transporter | |||
| 10385 | 181 aa hypothetical protein | |||
| 10390 | M | M.RdeR3ORF10310P (100% identity) | M.RdeR5ORF10390P | |
| 10395 | AAA family ATPase | |||
| plasmid unnamed | ||||
| 18550 | 282 aa hypothetical protein | |||
| 18555 | M | M.RdeR2ORF2643P (100% identity) | RGATCY | M.RdeR5ORF18555P |
| 18560 | class I SAM-dependent methyltransferase | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 3210 | APC family permease | |||
| 3215 | R | RdeR3ORF3230P (100% identity) | RdeR5ORF3230P | |
| 3220 | type II toxin-antitoxin system RelE/ParE family | |||
| 3225 | HigA family addiction module antitoxin | |||
| 3230 | M | M.RdeR3ORF3230P (94% identity) | M.RdeR5ORF3230P | |
| 3235 | 148 aa hypothetical protein | |||
| 10680 | cysteine dioxygenase family protein | |||
| 10690 | R | RdeR3ORF10615P (100% identity) | RdeR5ORF10695P | |
| 10695 | M | M.Rsp24678ORF5071P (99% identity) | M.RdeR5ORF10695P | |
| 10700 | Fic family protein | |||