Escherichia coli TH9F11 |
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Putative Escherichia coli TH9F11 RM systems
Ref: Lv,L. et al. unpublished
REBASE ref # 33245
| Sequence length: | GenBank #: | |
| Chromosome: | 4,884,596 bp | CP054191 |
| plasmid pHNTH9F11-1: | 407,456 bp | CP054192 |
| plasmid pHNTH9F11-2: | 92,646 bp | CP054193 |
REBASE acronym: EcoTH9F11
Org_num: 53937
All begin HRL54_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 3890 | transposase | |||
| 3895 | R | SspZ54ORF5015P (100% identity) | TGANNNNNNCTTC | EcoTH9F11ORF3900P |
| 3900 | M | M.SspZ54ORF5015P (100% identity) | TGANNNNNNCTTC | M.EcoTH9F11ORF3900P |
| 3905 | S | S.SspZ54ORF5015P (100% identity) | TGANNNNNNCTTC | S.EcoTH9F11ORF3900P |
| 3910 | AAA family ATPase | |||
| plasmid pHNTH9F11-2 | ||||
| 25945 | type II toxin-antitoxin system Phd/YefM family | |||
| 25950 | M | M.Efe9LTORF43980P (100% identity) | GAGNNNNNRTGA | M.EcoTH9F11ORF25950P |
| 25955 | S | S.Efe7LTORF43470P (100% identity) | GAGNNNNNRTGA | S.EcoTH9F11ORF25950P |
| 25960 | R | Efe9LTORF43980P (99% identity) | GAGNNNNNRTGA | EcoTH9F11ORF25950P |
| 25965 | 3-phosphatase | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1645 | cell division protein DamX | |||
| 1650 | M | M.UbaC1152DamP (100% identity) | GATC | M.EcoTH9F11DamP |
| 1655 | ribulose-phosphate 3-epimerase | |||
| 2175 | DUF2556 family protein | |||
| 2180 | M | M.EcoOS437ORF17830P (100% identity) | ATGCAT | M.EcoTH9F11ORF2180P |
| 2185 | DNA-binding transcriptional regulator Fis | |||
| 9155 | phosphohydrolase | |||
| 9160 | M | M.SflLIN6DcmP (100% identity) | CCWGG | M.EcoTH9F11DcmP |
| 9165 | V | V.EcoOS437DcmP (100% identity) | CCWGG | V.EcoTH9F11DcmP |
| 9170 | drug/metabolite exporter YedA | |||
| 20245 | HNH endonuclease | |||
| 20250 | R | SflN101ORF11875P (100% identity) | EcoTH9F11ORF20250P | |
| 20255 | AAA family ATPase | |||
| plasmid pHNTH9F11-1 | ||||
| 24115 | 55 aa hypothetical protein | |||
| 24120 | M | M.YpsF1ORFCP (100% identity) | CCWGG | M.EcoTH9F11ORF24120P |
| 24125 | thermonuclease family protein | |||
| 24910 | BREX-1 system phosphatase PglZ type A | |||
| 24915 | RM | PteTP22ORF16040P (100% identity) | EcoTH9F11ORF24915P | |
| 24920 | DUF262 domain-containing protein | |||
| 25505 | 48 aa hypothetical protein | |||
| 25510 | M | M.YpsF1ORFBP (100% identity) | M.EcoTH9F11ORF25510P | |
| 25515 | 202 aa hypothetical protein | |||
| 25620 | DNA-binding protein | |||
| 25625 | M | M.YpsF1ORFDP (100% identity) | GATC | M.EcoTH9F11ORF25625P |
| 25630 | 284 aa hypothetical protein | |||
| plasmid pHNTH9F11-2 | ||||
| 26055 | SPFH/Band 7/PHB domain protein | |||
| 26070 | M | M.SenSL0052ORF26270P (99% identity) | M.EcoTH9F11ORF26070P | |
| 26075 | recombination-associated protein RdgC | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 20250 | HNH endonuclease | |||
| 20255 | R | SflN101McrBP (100% identity) | EcoTH9F11McrBP | |
| 20260 | R | SflN101McrCP (100% identity) | EcoTH9F11McrCP | |
| 20265 | 128 aa hypothetical protein | |||