Escherichia coli 2018C-5284a |
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Putative Escherichia coli 2018C-5284a RM systems
Ref: Chen,J. et al. unpublished
REBASE ref # 33268
| Sequence length: | GenBank #: | |
| Chromosome: | 5,488,811 bp | CP090860 |
| plasmid p2018C-5284a_1: | 92,709 bp | CP090861 |
| plasmid p2018C-5284a_2: | 87,918 bp | CP090862 |
| plasmid p2018C-5284a_3: | 61,934 bp | CP090863 |
REBASE acronym: Eco5284a
Org_num: 53266
All begin ETY48_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 25820 | endoribonuclease SymE | |||
| 25825 | S | S.EcosPA8ORF17615P (100% identity) | CACNNNNNNNCTGG | S.Eco5284aORF25830P |
| 25830 | M | M.Eco864ORF24060P (100% identity) | CACNNNNNNNCTGG | M.Eco5284aORF25830P |
| 25835 | R | Ecos1613ORF27060P (100% identity) | CACNNNNNNNCTGG | Eco5284aORF25830P |
| 25840 | DUF262 domain-containing HNH endonuclease family | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 8295 | TrmB family transcriptional regulator | |||
| 8300 | M | M.EcosPA8ORF27255P (100% identity) | M.Eco5284aORF8300P | |
| 8315 | DUF1737 domain-containing protein | |||
| 9185 | 35 aa hypothetical protein | |||
| 9190 | M | M.Ecos15739ORF2910P (100% identity) | M.Eco5284aORF9190P | |
| 9195 | 329 aa hypothetical protein | |||
| 9200 | R | Ecos15739ORF2910P (100% identity) | Eco5284aORF9190P | |
| 9205 | DUF1367 family protein | |||
| 12990 | drug/metabolite exporter YedA | |||
| 12995 | V | V.EcosPA8DcmP (100% identity) | CCWGG | V.Eco5284aDcmP |
| 13000 | M | M.SflLIN6DcmP (100% identity) | CCWGG | M.Eco5284aDcmP |
| 13005 | phosphohydrolase | |||
| 19940 | DNA-binding transcriptional regulator Fis | |||
| 19945 | M | M.EcosPA8ORF11510P (100% identity) | ATGCAT | M.Eco5284aORF19945P |
| 19950 | DUF2556 family protein | |||
| 20455 | ribulose-phosphate 3-epimerase | |||
| 20460 | M | M.UbaC1152DamP (100% identity) | GATC | M.Eco5284aDamP |
| 20465 | cell division protein DamX | |||
| 25560 | transposase | |||
| 25565 | R | Ecos1613ORF26795P (100% identity) | Eco5284aORF25565P | |
| 25570 | N-acetylneuraminic acid mutarotase | |||
| 25600 | DEAD/DEAH box helicase | |||
| 25605 | RM | EcosPA8ORF17390P (100% identity) | GAAABCC | Eco5284aORF25605P |
| plasmid p2018C-5284a_1 | ||||
| 27440 | 73 aa hypothetical protein | |||
| 27445 | M | M.EcosPA8ORF27775P (100% identity) | M.Eco5284aORF27445P | |
| 27450 | 101 aa hypothetical protein | |||
| plasmid p2018C-5284a_2 | ||||
| 28015 | 103 aa hypothetical protein | |||
| 28020 | M | M.Eco20169ORF27800P (100% identity) | M.Eco5284aORF28020P | |
| 28025 | 73 aa hypothetical protein | |||
| plasmid p2018C-5284a_3 | ||||
| 28580 | 73 aa hypothetical protein | |||
| 28585 | M | M.Eco20169ORF28180P (100% identity) | SAY | M.Eco5284aORF28585P |
| 28590 | 103 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 25805 | DUF1127 domain-containing protein | |||
| 25810 | R | Ecos1613GmrSP (100% identity) | Eco5284aGmrSP | |
| 25815 | R | EcosPA8GmrSDP (55% identity) | Eco5284aGmrDP | |
| 25820 | endoribonuclease SymE | |||