Escherichia coli isolate DCE7 |
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Putative Escherichia coli isolate DCE7 RM systems
Ref: Ma,J. and Yao,H. unpublished
REBASE ref # 29333
| Sequence length: | GenBank #: | |
| Chromosome: | 4,417,652 bp | CP090611 |
| plasmid pDCE7-1: | 420,355 bp | CP090612 |
| plasmid pDCE7-2: | 94,297 bp | CP090613 |
REBASE acronym: EcoDCE7
Org_num: 53969
All begin LZG50_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 18440 | DUF4942 domain-containing protein | |||
| 18445 | M | M.EcoC84497ORFGP (100% identity) | TTANNNNNNRTCC | M.EcoDCE7ORF18445P |
| 18450 | S | S.EcoC84497ORFGP (100% identity) | TTANNNNNNRTCC | S.EcoDCE7ORF18445P |
| 18455 | R | EcoA25IP (100% identity) | TTANNNNNNRTCC | EcoDCE7ORF18445P |
| 18465 | NADPH-dependent aldehyde reductase Ahr | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1885 | cell division protein DamX | |||
| 1890 | M | M.SspPIBDamP (100% identity) | GATC | M.EcoDCE7DamP |
| 1895 | ribulose-phosphate 3-epimerase | |||
| 2410 | DUF2556 family protein | |||
| 2415 | M | M.EspP079ORF3959P (100% identity) | ATGCAT | M.EcoDCE7ORF2415P |
| 2420 | DNA-binding transcriptional regulator Fis | |||
| 11455 | DUF3927 family protein | |||
| 11470 | M | M.Eco36084ORF23060P (100% identity) | M.EcoDCE7ORF11470P | |
| 11475 | TrmB family transcriptional regulator | |||
| 16400 | flagellar basal body P-ring formation chaperone | |||
| 16405 | M | M.EcoS7438ORFEP (100% identity) | CCWGG | M.EcoDCE7ORF16405P |
| 16410 | R | EcoS7438ORFEP (100% identity) | CCWGG | EcoDCE7ORF16405P |
| 16415 | flagellar biosynthesis anti-sigma factor FlgM | |||
| 17995 | phage lysis protein EssD | |||
| 18000 | M | M.Sso63633ORF22290P (100% identity) | M.EcoDCE7ORF18000P | |
| 18005 | 67 aa hypothetical protein | |||
| 18040 | LexA family transcriptional regulator | |||
| 18045 | M | M.EcocdtDamP (93% identity) | GATC | M.EcoDCE7ORF18045P |
| 18050 | 28 aa hypothetical protein | |||
| plasmid pDCE7-1 | ||||
| 23820 | drug/metabolite exporter YedA | |||
| 23825 | V | V.EcoSC477DcmP (100% identity) | V.EcoDCE7DcmP | |
| 23830 | M | M.EcoC84497DcmP (100% identity) | CCWGG | M.EcoDCE7DcmP |
| 23835 | phosphohydrolase | |||
| plasmid pDCE7-2 | ||||
| 24240 | 73 aa hypothetical protein | |||
| 24245 | M | M.Xca80ORFEP (100% identity) | M.EcoDCE7ORF24245P | |
| 24250 | 97 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 18425 | HNH endonuclease | |||
| 18430 | R | EcoA25McrCP (99% identity) | EcoDCE7McrCP | |
| 18435 | R | EcoA25McrBP (100% identity) | EcoDCE7McrBP | |
| 18440 | DUF4942 domain-containing protein | |||