Chlorobium tepidum TLS |
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Putative Chlorobium tepidum TLS RM systems
Ref: Eisen,J.A. et al. Proc. Natl. Acad. Sci. U.S.A. 99 (14), 9509-9514 (2002)
REBASE ref # 7519
Complete sequence: 2,154,946 bp
GenBank #: AE006470 (NC_002932)
REBASE acronym: CteT
Org_num: 3482
All begin CT
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 674 | vrlI protein | |||
| 675 | M | M.GsuAM1ORF3990P (89% identity) | GCAYNNNNNTCG | M.CteTII |
| 676 | 565 aa conserved hypothetical protein | |||
| 677 | 52 aa hypothetical protein | |||
| 678 | 374 aa conserved hypothetical protein | |||
| 679 | S | S.Ksa22ORF20690P (55% identity) | GCAYNNNNNTCG | S.CteTII |
| 680 | 185 aa hypothetical protein | |||
| 681 | 328 aa hypothetical protein | |||
| 682 | 249 aa hypothetical protein | |||
| 683 | 767 aa conserved hypothetical protein | |||
| 684 | R | type I restriction system endonuclease, | GCAYNNNNNTCG | CteTIIP |
| 685 | 99 aa hypothetical protein | |||
| 1877 | 92 aa hypothetical protein | |||
| 1878 | R | Tph505ORFBP (82% identity) | CAYNNNNNCTC | CteTIP |
| 1879 | 193 aa conserved hypothetical protein | |||
| 1880 | S | S.GmoMB1ORFFP (41% identity) | CAYNNNNNCTC | S.CteTI |
| 1881 | M | M.BceH111I (87% identity) | CAYNNNNNCTC | M.CteTI |
| 1882 | glycosyl transferase | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1158 | 76 aa hypothetical protein | |||
| ??? | RM | CphBORF747P (53% identity) | CteTORF1159P | |
| ??? | type III restriction system endonuclease | |||
| ??? | type III restriction system endonuclease | |||
| ??? | RM | Hri593ORF20835P (82% identity) | CteTORF1161P | |
| 1162 | A/G-specific adenine glycosylase, putative | |||
| 1912 | 66 aa hypothetical protein | |||
| 1913 | M | M.CspMVAYORF8890P (98% identity) | M.CteTORF1913P | |
| 1914 | 455 aa hypothetical protein | |||
| 2121 | methyltransferse, putative | |||
| 2122 | R | restriction endonuclease-related protein | CCWGG | CteTORF2122P |
| 2123 | glycine cleavage system P protein, subunit 2 | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 907 | 252 aa hypothetical protein | |||
| 908 | M | M.BspBDU8ORF12585P (67% identity) | M.CteTORF908P | |
| 909 | 402 aa hypothetical protein | |||
| 910 | 198 aa hypothetical protein | |||
| 911 | R | AteNZORF7280P (94% identity) | CteTORF908P | |
| 912 | 320 aa hypothetical protein | |||
| 1728 | transcriptional regulator, ArsR family | |||
| 1729 | M | M.TspWL17ORF1045BP (36% identity) | M.CteTORF1729P | |
| 1730 | R | Tte43061ORF8310P (88% identity) | CteTORF1729P | |
| 1731 | 263 aa conserved hypothetical protein | |||