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Putative Salmonella enterica 2016062-SE RM systems
Ref: Bai,L. et al. unpublished
REBASE ref # 33757
Sequence length: | GenBank #: | |
Chromosome: | 4,982,119 bp | CP090539 |
plasmid p2016062-242: | 242,063 bp | CP090540 |
REBASE acronym: Sen62SE
Org_num: 55138
All begin L0F59_
Type I | ||||
---|---|---|---|---|
ORF | Gene | Most similar | Specificity | Name |
Chromosome | ||||
20660 | restriction endonuclease | |||
20665 | R | StyUK1IIP (100% identity) | GAGNNNNNNRTAYG | Sen62SEORF20670P |
20670 | M | M.StyLTIII (100% identity) | GAGNNNNNNRTAYG | M.Sen62SEORF20670P |
20675 | S | S.StyUK1II (100% identity) | GAGNNNNNNRTAYG | S.Sen62SEORF20670P |
20680 | endoribonuclease SymE | |||
Type II | ||||
ORF | Gene | Most similar | Specificity | Name |
Chromosome | ||||
1810 | cell division protein DamX | |||
1815 | M | M.StyTDamP (100% identity) | GATC | M.Sen62SEDamP |
1820 | ribulose-phosphate 3-epimerase | |||
3225 | DUF2732 domain-containing protein | |||
3230 | M | M.SensSZL38ORF19965P (100% identity) | GATC | M.Sen62SEORF3230P |
3235 | replication endonuclease | |||
6225 | thermonuclease family protein | |||
6230 | M | M.StyCORF187P (49% identity) | M.Sen62SEORF6230P | |
6235 | IS6-like element IS26 family transposase | |||
6625 | ead/Ea22-like family protein | |||
6630 | M | M.StyTORF1914P (100% identity) | ATGCAT | M.Sen62SEORF6630P |
6635 | DUF551 domain-containing protein | |||
9965 | PerC family transcriptional regulator | |||
9970 | M | M.Ssp17155ORFIP (100% identity) | GATC | M.Sen62SEORF9970P |
9975 | RusA family crossover junction | |||
10220 | phosphohydrolase | |||
10225 | M | M.StyUK1Dcm (100% identity) | CCWGG | M.Sen62SEDcmP |
10230 | V | V.StyUK1DcmP (100% identity) | CCWGG | V.Sen62SEDcmP |
10235 | drug/metabolite exporter YedA | |||
20820 | BREX system P-loop protein BrxC | |||
20825 | RM | StyUK1IV (100% identity) | GATCAG | Sen62SEORF20825P |
20830 | AAA family ATPase | |||
22305 | LexA family transcriptional regulator | |||
22310 | M | M.SflLIN17ORF20615P (100% identity) | GATC | M.Sen62SEORF22310P |
22315 | PerC family transcriptional regulator | |||
plasmid p2016062-242 | ||||
24885 | 55 aa hypothetical protein | |||
24890 | M | M.YpsF1ORFCP (100% identity) | CCWGG | M.Sen62SEORF24890P |
24895 | thermonuclease family protein | |||
25560 | 48 aa hypothetical protein | |||
25565 | M | M.YpsF1ORFBP (100% identity) | M.Sen62SEORF25565P | |
25570 | 202 aa hypothetical protein | |||
25685 | DNA-binding protein | |||
25690 | M | M.YpsF1ORFDP (100% identity) | GATC | M.Sen62SEORF25690P |
25695 | 277 aa hypothetical protein | |||
Type III | ||||
ORF | Gene | Most similar | Specificity | Name |
Chromosome | ||||
18355 | small effector SsaA | |||
18360 | R | StyUK1IP (99% identity) | CAGAG | Sen62SEORF18365P |
18365 | M | M.StyUK1I (100% identity) | CAGAG | M.Sen62SEORF18365P |
18370 | MFS transporter | |||
Type IV | ||||
ORF | Gene | Most similar | Specificity | Name |
Chromosome | ||||
20655 | BrnT family toxin | |||
20660 | R | StyUK1MrrP (100% identity) | Sen62SEMrrP | |
20665 | type I restriction-modification system |