Salmonella enterica 2010112-SE |
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Putative Salmonella enterica 2010112-SE RM systems
Ref: Bai,L. et al. unpublished
REBASE ref # 33757
| Sequence length: | GenBank #: | |
| Chromosome: | 4,963,388 bp | CP090541 |
| plasmid p2010112-144: | 144,387 bp | CP090542 |
REBASE acronym: Sen12SE
Org_num: 55137
All begin L0F62_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 20385 | restriction endonuclease | |||
| 20390 | R | StyUK1IIP (100% identity) | GAGNNNNNNRTAYG | Sen12SEORF20395P |
| 20395 | M | M.StyLTIII (100% identity) | GAGNNNNNNRTAYG | M.Sen12SEORF20395P |
| 20400 | S | S.StyUK1II (100% identity) | GAGNNNNNNRTAYG | S.Sen12SEORF20395P |
| 20405 | endoribonuclease SymE | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1810 | cell division protein DamX | |||
| 1815 | M | M.StyTDamP (100% identity) | GATC | M.Sen12SEDamP |
| 1820 | ribulose-phosphate 3-epimerase | |||
| 5425 | IS6-like element IS26 family transposase | |||
| 5430 | M | M.StyCORF187P (49% identity) | M.Sen12SEORF5430P | |
| 5435 | thermonuclease family protein | |||
| 6115 | ead/Ea22-like family protein | |||
| 6120 | M | M.StyTORF1914P (100% identity) | ATGCAT | M.Sen12SEORF6120P |
| 6125 | DUF551 domain-containing protein | |||
| 9455 | PerC family transcriptional regulator | |||
| 9460 | M | M.Ssp17155ORFIP (100% identity) | GATC | M.Sen12SEORF9460P |
| 9465 | RusA family crossover junction | |||
| 9710 | phosphohydrolase | |||
| 9715 | M | M.StyUK1Dcm (100% identity) | CCWGG | M.Sen12SEDcmP |
| 9720 | V | V.StyUK1DcmP (100% identity) | CCWGG | V.Sen12SEDcmP |
| 9725 | drug/metabolite exporter YedA | |||
| 20545 | BREX system P-loop protein BrxC | |||
| 20550 | RM | StyUK1IV (100% identity) | GATCAG | Sen12SEORF20550P |
| 20555 | AAA family ATPase | |||
| plasmid p2010112-144 | ||||
| 24775 | 55 aa hypothetical protein | |||
| 24780 | M | M.YpsF1ORFCP (100% identity) | CCWGG | M.Sen12SEORF24780P |
| 24785 | thermonuclease family protein | |||
| 24955 | DNA-binding protein | |||
| 24960 | M | M.YpsF1ORFDP (100% identity) | GATC | M.Sen12SEORF24960P |
| 24965 | 277 aa hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 17860 | small effector SsaA | |||
| 17865 | R | StyUK1IP (99% identity) | CAGAG | Sen12SEORF17870P |
| 17870 | M | M.StyUK1I (100% identity) | CAGAG | M.Sen12SEORF17870P |
| 17875 | MFS transporter | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 20380 | BrnT family toxin | |||
| 20385 | R | StyUK1MrrP (100% identity) | Sen12SEMrrP | |
| 20390 | type I restriction-modification system | |||