Salmonella enterica 2017028-SE |
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Putative Salmonella enterica 2017028-SE RM systems
Ref: Bai,L. et al. unpublished
REBASE ref # 33757
| Sequence length: | GenBank #: | |
| Chromosome: | 5,019,931 bp | CP090545 |
| plasmid p2017028-250: | 250,700 bp | CP090546 |
REBASE acronym: Sen28SE
Org_num: 55141
All begin L0F57_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 20930 | restriction endonuclease | |||
| 20935 | R | StyUK1IIP (100% identity) | GAGNNNNNNRTAYG | Sen28SEORF20940P |
| 20940 | M | M.StyLTIII (100% identity) | GAGNNNNNNRTAYG | M.Sen28SEORF20940P |
| 20945 | S | S.StyUK1II (100% identity) | GAGNNNNNNRTAYG | S.Sen28SEORF20940P |
| 20950 | endoribonuclease SymE | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1805 | cell division protein DamX | |||
| 1810 | M | M.StyTDamP (100% identity) | GATC | M.Sen28SEDamP |
| 1815 | ribulose-phosphate 3-epimerase | |||
| 3220 | DUF2732 domain-containing protein | |||
| 3225 | M | M.SensSZL38ORF19965P (100% identity) | GATC | M.Sen28SEORF3225P |
| 3230 | replication endonuclease | |||
| 6195 | thermonuclease family protein | |||
| 6200 | M | M.StyCORF187P (49% identity) | M.Sen28SEORF6200P | |
| 6205 | IS6-like element IS26 family transposase | |||
| 6595 | ead/Ea22-like family protein | |||
| 6600 | M | M.StyTORF1914P (100% identity) | ATGCAT | M.Sen28SEORF6600P |
| 6605 | DUF551 domain-containing protein | |||
| 9930 | PerC family transcriptional regulator | |||
| 9935 | M | M.Ssp17155ORFIP (100% identity) | GATC | M.Sen28SEORF9935P |
| 9940 | RusA family crossover junction | |||
| 10185 | phosphohydrolase | |||
| 10190 | M | M.StyUK1Dcm (100% identity) | CCWGG | M.Sen28SEDcmP |
| 10195 | V | V.StyUK1DcmP (100% identity) | CCWGG | V.Sen28SEDcmP |
| 10200 | drug/metabolite exporter YedA | |||
| 18790 | phage holin, lambda family | |||
| 18795 | M | M.SensSZL38ORF10585P (100% identity) | M.Sen28SEORF18795P | |
| 18800 | 92 aa hypothetical protein | |||
| 18825 | LexA family transcriptional regulator | |||
| 18830 | M | M.SflN101ORF11410P (100% identity) | GATC | M.Sen28SEORF18830P |
| 18835 | PerC family transcriptional regulator | |||
| 21090 | BREX system P-loop protein BrxC | |||
| 21095 | RM | StyUK1IV (100% identity) | GATCAG | Sen28SEORF21095P |
| 21100 | AAA family ATPase | |||
| 22585 | LexA family transcriptional regulator | |||
| 22590 | M | M.SflLIN17ORF20615P (100% identity) | GATC | M.Sen28SEORF22590P |
| 22595 | PerC family transcriptional regulator | |||
| plasmid p2017028-250 | ||||
| 25165 | 55 aa hypothetical protein | |||
| 25170 | M | M.YpsF1ORFCP (100% identity) | CCWGG | M.Sen28SEORF25170P |
| 25175 | thermonuclease family protein | |||
| 25895 | 48 aa hypothetical protein | |||
| 25900 | M | M.YpsF1ORFBP (100% identity) | M.Sen28SEORF25900P | |
| 25905 | 202 aa hypothetical protein | |||
| 26010 | DNA-binding protein | |||
| 26015 | M | M.YpsF1ORFDP (100% identity) | GATC | M.Sen28SEORF26015P |
| 26020 | 277 aa hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 18320 | small effector SsaA | |||
| 18325 | R | StyUK1IP (99% identity) | CAGAG | Sen28SEORF18330P |
| 18330 | M | M.StyUK1I (100% identity) | CAGAG | M.Sen28SEORF18330P |
| 18335 | MFS transporter | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 20925 | BrnT family toxin | |||
| 20930 | R | StyUK1MrrP (100% identity) | Sen28SEMrrP | |
| 20935 | type I restriction-modification system | |||