Escherichia coli STEC1025 |
| [index] - [schematics] - [save as Word doc] |
|
|
|
Putative Escherichia coli STEC1025 RM systems
Ref: Pan,Y. et al. unpublished
REBASE ref # 33407
| Sequence length: | GenBank #: | |
| Chromosome: | 5,112,390 bp | CP061229 |
| plasmid pSTEC1025_1: | 89,747 bp | CP061230 |
| plasmid pSTEC1025_2: | 60,351 bp | CP061231 |
REBASE acronym: EcoSTEC1025
Org_num: 53895
All begin H6S09_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 2990 | NADPH-dependent aldehyde reductase Ahr | |||
| 3000 | R | SflFF22ORF2075P (100% identity) | GACNNNNNNRTAAY | EcoSTEC1025ORF3010P |
| 3005 | S | S.SsoSE61ORF6540P (100% identity) | GACNNNNNNRTAAY | S.EcoSTEC1025ORF3010P |
| 3010 | M | M.SsoSE61ORF6540P (100% identity) | GACNNNNNNRTAAY | M.EcoSTEC1025ORF3010P |
| 3015 | DUF4942 domain-containing protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 8795 | TrmB family transcriptional regulator | |||
| 8800 | M | M.EcoSTEC1080ORF17030P (100% identity) | M.EcoSTEC1025ORF8800P | |
| 8805 | 103 aa hypothetical protein | |||
| 10400 | TrmB family transcriptional regulator | |||
| 10405 | M | M.EcoC719ORF14215P (100% identity) | M.EcoSTEC1025ORF10405P | |
| 10420 | tellurite resistance TerB family protein | |||
| 11575 | phage terminase large subunit | |||
| 11580 | M | M.EcoSTEC1080ORF13995P (100% identity) | M.EcoSTEC1025ORF11580P | |
| 11585 | DUF1804 family protein | |||
| 18815 | phage tail sheath protein | |||
| 18820 | M | M.EcoSTEC1080ORF5965P (100% identity) | M.EcoSTEC1025ORF18820P | |
| 18825 | recombinase family protein | |||
| 20620 | integrase | |||
| 20625 | R | EcoF10ORF24225P (100% identity) | GAAC | EcoSTEC1025ORF20625P |
| 20630 | ISL3 family transposase | |||
| 20630 | ISL3 family transposase | |||
| 20635 | M | M.EcoSTEC413ORF4250P (100% identity) | ACCTGC | M.EcoSTEC1025ORF20635P |
| 20640 | 500 aa hypothetical protein | |||
| 22705 | DNA-binding transcriptional regulator Fis | |||
| 22710 | M | M.SspS13ORF21055P (100% identity) | ATGCAT | M.EcoSTEC1025ORF22710P |
| 22715 | DUF2556 family protein | |||
| 23260 | ribulose-phosphate 3-epimerase | |||
| 23265 | M | M.UbaC1152DamP (100% identity) | GATC | M.EcoSTEC1025DamP |
| 23270 | cell division protein DamX | |||
| plasmid pSTEC1025_1 | ||||
| 25320 | 73 aa hypothetical protein | |||
| 25325 | M | M.SflN92ORF24820P (100% identity) | M.EcoSTEC1025ORF25325P | |
| 25330 | 101 aa hypothetical protein | |||
| plasmid pSTEC1025_2 | ||||
| 26080 | 73 aa hypothetical protein | |||
| 26085 | M | M.SenSE144ORF24980P (99% identity) | M.EcoSTEC1025ORF26085P | |
| 26090 | 97 aa hypothetical protein | |||