Escherichia coli STEC508 |
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Putative Escherichia coli STEC508 RM systems
Ref: Yanyu,P. unpublished
REBASE ref # 33408
| Sequence length: | GenBank #: | |
| Chromosome: | 5,637,793 bp | CP060103 |
| plasmid pSTEC508: | 88,858 bp | CP060104 |
REBASE acronym: EcoSTEC508
Org_num: 53918
All begin H6S25_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 10980 | M48 family metallopeptidase | |||
| 10985 | R | PmeBin330ORFCP (100% identity) | GAGNNNNNGTTY | EcoSTEC508ORF11005P |
| 10990 | macro domain-containing protein | |||
| 10995 | DUF4433 domain-containing protein | |||
| 11000 | S | S.EcosB2CORFEP (100% identity) | GAGNNNNNGTTY | S.EcoSTEC508ORF11005P |
| 11005 | M | M.EcosB2CORFEP (100% identity) | GAGNNNNNGTTY | M.EcoSTEC508ORF11005P |
| 11010 | transcription factor | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1755 | cell division protein DamX | |||
| 1760 | M | M.UbaC1152DamP (100% identity) | GATC | M.EcoSTEC508DamP |
| 1765 | ribulose-phosphate 3-epimerase | |||
| 2320 | DUF2556 family protein | |||
| 2325 | M | M.EcoSTEC509ORF2435P (100% identity) | ATGCAT | M.EcoSTEC508ORF2325P |
| 2330 | DNA-binding transcriptional regulator Fis | |||
| 5745 | PerC family transcriptional regulator | |||
| 5750 | M | M.EcoDEC8CORF4115P (100% identity) | GATC | M.EcoSTEC508ORF5750P |
| 5755 | LexA family transcriptional regulator | |||
| 8390 | recombination protein NinB | |||
| 8395 | M | M.SflN97ORF15810P (100% identity) | GATC | M.EcoSTEC508ORF8395P |
| 8400 | NinE family protein | |||
| 17585 | drug/metabolite exporter YedA | |||
| 17590 | V | V.SflSTLE3DcmP (100% identity) | CCWGG | V.EcoSTEC508DcmP |
| 17595 | M | M.SflSTLE3DcmP (100% identity) | CCWGG | M.EcoSTEC508DcmP |
| 17600 | HD domain-containing protein | |||
| 18190 | NinE family protein | |||
| 18195 | M | M.Esp9308ORFFP (72% identity) | GATC | M.EcoSTEC508ORF18195P |
| 18200 | HNH endonuclease | |||
| plasmid pSTEC508 | ||||
| 28245 | 103 aa hypothetical protein | |||
| 28250 | M | M.EcopO26ORF185P (100% identity) | SAY | M.EcoSTEC508ORF28250P |
| 28255 | 72 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 24465 | endoribonuclease SymE | |||
| 24470 | R | EcoSTEC416GmrSDP (100% identity) | EcoSTEC508GmrSDP | |
| 24475 | DUF1127 domain-containing protein | |||