Rhodococcus species DMF-1 |
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Putative Rhodococcus species DMF-1 RM systems
Ref: Chi,B. et al. unpublished
REBASE ref # 33747
| Sequence length: | GenBank #: | |
| Chromosome: | 5,645,979 bp | CP090442 |
| plasmid plas-1: | 118,039 bp | CP090443 |
REBASE acronym: RspDMF1
Org_num: 55107
All begin LZP97_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 17930 | 267 aa hypothetical protein | |||
| 17935 | S | S.RruY14ORF17430P (100% identity) | S.RspDMF1ORF17940P | |
| 17940 | M | M.RruP25ORFEP (58% identity) | M.RspDMF1ORF17940P | |
| 17945 | 690 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 3620 | TerD family protein | |||
| 3625 | M | M.RruP25ORFCP (87% identity) | M.RspDMF1ORF3625P | |
| 3630 | DEAD/DEAH box helicase family protein | |||
| 3650 | DEAD/DEAH box helicase | |||
| 3655 | RM | RruP25ORFBP (100% identity) | RspDMF1ORF3655P | |
| 22555 | sulfite exporter TauE/SafE family protein | |||
| 22560 | V | V.RspP14ORFGP (100% identity) | V.RspDMF1ORF22565P | |
| 22565 | M | M.RruYYLORF25000P (90% identity) | M.RspDMF1ORF22565P | |
| 22570 | 82 aa hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| plasmid plas-1 | ||||
| 26505 | PIN-like domain-containing protein | |||
| 26510 | M | M.GteJC02ORF23845BP (58% identity) | M.RspDMF1ORF26510P | |
| ??? | R | MauHPB11ORF27615P (53% identity) | RspDMF1ORF26510P | |
| 26525 | IS3 family transposase | |||