Escherichia coli B379 |
| [index] - [schematics] - [save as Word doc] |
|
|
|
Putative Escherichia coli B379 RM systems
Ref: Yue,M. unpublished
REBASE ref # 30996
| Sequence length: | GenBank #: | |
| Chromosome: | 4,801,759 bp | CP090456 |
| plasmid pB379_2: | 152,061 bp | CP090457 |
| plasmid pB379_3: | 147,204 bp | CP090458 |
REBASE acronym: EcoB379
Org_num: 53637
All begin LZ684_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 5750 | GTPase family protein | |||
| 5755 | M | M.Eco886RtORF3295P (100% identity) | M.EcoB379ORF5755P | |
| 5760 | S | S.Eco2919ORF20865P (71% identity) | S.EcoB379ORF5755P | |
| 5765 | R | Eco502CCORF11100P (100% identity) | EcoB379ORF5755P | |
| 5770 | transposase domain-containing protein | |||
| plasmid pB379_2 | ||||
| 23080 | IS3 family transposase | |||
| 23085 | R | SflSTLE3ORF22785P (100% identity) | EcoB379ORF23100P | |
| 23090 | DUF4268 domain-containing protein | |||
| 23095 | S | S.Sen557928ORF18960P (100% identity) | S.EcoB379ORF23100P | |
| 23100 | M | M.SflSTLE3ORF22785P (100% identity) | M.EcoB379ORF23100P | |
| 23105 | SPFH/Band 7/PHB domain protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 2495 | DUF2556 family protein | |||
| 2500 | M | M.SspS13ORF21055P (100% identity) | ATGCAT | M.EcoB379ORF2500P |
| 2505 | DNA-binding transcriptional regulator Fis | |||
| 9435 | HD domain-containing protein | |||
| 9440 | M | M.SflSTLE3DcmP (100% identity) | CCWGG | M.EcoB379DcmP |
| 9445 | V | V.SflSTLE3DcmP (100% identity) | CCWGG | V.EcoB379DcmP |
| 9450 | drug/metabolite exporter YedA | |||
| 11485 | DUF977 family protein | |||
| 11490 | M | M.SsoSE61ORF20220P (100% identity) | M.EcoB379ORF11490P | |
| 11495 | 139 aa hypothetical protein | |||
| 19965 | integrase | |||
| 19970 | R | EluCEB04ORF18755P (100% identity) | YGGCCR | EcoB379ORF19975P |
| 19975 | M | M.PanLORF19300P (100% identity) | YGGCCR | M.EcoB379ORF19975P |
| 19980 | integrase arm-type DNA-binding domain-containing | |||
| plasmid pB379_3 | ||||
| 24045 | IS6-like element IS26 family transposase | |||
| 24050 | R | Ssp3CORF24390P (100% identity) | CCWGG | EcoB379ORF24055P |
| 24055 | M | M.Ubap201ORF4P (100% identity) | CCWGG | M.EcoB379ORF24055P |
| 24060 | IS1 family transposase | |||
| 24335 | 103 aa hypothetical protein | |||
| 24340 | M | M.UbapRSB107ORFAP (100% identity) | SAY | M.EcoB379ORF24340P |
| 24345 | 73 aa hypothetical protein | |||