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Putative Salmonella enterica subsp. enterica serovar Typhimurium SJTUF10452 RM systems
Ref: Shang,D. et al. unpublished
REBASE ref # 33786
Sequence length: | GenBank #: | |
Chromosome: | 4,779,995 bp | CP047535 |
plasmid unnamed: | 243,126 bp | CP047536 |
REBASE acronym: Sen10452
Org_num: 55358
All begin DXN08_
Type I | ||||
---|---|---|---|---|
ORF | Gene | Most similar | Specificity | Name |
Chromosome | ||||
19480 | restriction endonuclease | |||
19485 | R | StyUK1IIP (100% identity) | GAGNNNNNNRTAYG | Sen10452ORF19490P |
19490 | M | M.StyLTIII (100% identity) | GAGNNNNNNRTAYG | M.Sen10452ORF19490P |
19495 | S | S.StyUK1II (100% identity) | GAGNNNNNNRTAYG | S.Sen10452ORF19490P |
19500 | endoribonuclease SymE | |||
Type II | ||||
ORF | Gene | Most similar | Specificity | Name |
Chromosome | ||||
885 | cell division protein DamX | |||
890 | M | M.StyTDamP (100% identity) | GATC | M.Sen10452DamP |
895 | ribulose-phosphate 3-epimerase | |||
1385 | DUF2556 domain-containing protein | |||
1390 | M | M.StyUK1III (100% identity) | ATGCAT | M.Sen10452ORF1390P |
1395 | DNA-binding transcriptional regulator Fis | |||
2305 | DUF2732 family protein | |||
2310 | M | M.SensSZL38ORF19965P (100% identity) | GATC | M.Sen10452ORF2310P |
2315 | replication endonuclease | |||
4690 | IS6-like element IS26 family transposase | |||
4695 | M | M.StyCORF187P (49% identity) | M.Sen10452ORF4695P | |
4700 | nuclease | |||
5270 | ead/Ea22-like family protein | |||
5275 | M | M.StyTORF1914P (100% identity) | ATGCAT | M.Sen10452ORF5275P |
5280 | 92 aa hypothetical protein | |||
8595 | PerC family transcriptional regulator | |||
8600 | M | M.SenPS1ORF9505P (100% identity) | M.Sen10452ORF8600P | |
8605 | RusA family crossover junction | |||
8845 | phosphohydrolase | |||
8850 | M | M.StyUK1Dcm (100% identity) | CCWGG | M.Sen10452DcmP |
8855 | V | V.StyUK1DcmP (100% identity) | CCWGG | V.Sen10452DcmP |
8860 | drug/metabolite exporter YedA | |||
plasmid unnamed | ||||
23390 | DNA-binding protein | |||
23395 | M | M.YpsF1ORFDP (100% identity) | GATC | M.Sen10452ORF23395P |
23400 | 284 aa hypothetical protein | |||
23910 | DUF1173 family protein | |||
23915 | M | M.YpsF1ORFCP (100% identity) | CCWGG | M.Sen10452ORF23915P |
23920 | nuclease | |||
24560 | 108 aa hypothetical protein | |||
24565 | M | M.YpsF1ORFBP (100% identity) | M.Sen10452ORF24565P | |
24570 | 202 aa hypothetical protein | |||
Type III | ||||
ORF | Gene | Most similar | Specificity | Name |
Chromosome | ||||
16950 | 33 aa hypothetical protein | |||
16955 | R | StyUK1IP (99% identity) | CAGAG | Sen10452ORF16960P |
16960 | M | M.StyUK1I (100% identity) | CAGAG | M.Sen10452ORF16960P |
16965 | MFS transporter | |||
Type IV | ||||
ORF | Gene | Most similar | Specificity | Name |
Chromosome | ||||
19475 | BrnT family toxin | |||
19480 | R | StyUK1MrrP (100% identity) | Sen10452MrrP | |
19485 | type I restriction-modification system |