Leptodesmis sichuanensis PKUAC-SCTA121 |
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Putative Leptodesmis sichuanensis PKUAC-SCTA121 RM systems
Ref: Tang,J. et al. Front Microbiol (2021) In press
REBASE ref # 33540
Complete sequence: 5,348,817 bp
GenBank #: CP075171
REBASE acronym: LsiA121
Org_num: 54466
All begin KIK02_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 20155 | DNA methyltransferase | |||
| 20160 | R | TorNK122ORF20535P (90% identity) | LsiA121ORF20160P | |
| 20165 | 36 aa hypothetical protein | |||
| 20170 | XisI protein | |||
| 20175 | S | S.Mae87ORF27310P (47% identity) | S.LsiA121ORF20160P | |
| 20180 | ISAs1 family transposase | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 455 | 244 aa hypothetical protein | |||
| 460 | M | M.KspCCNU1ORF19115P (69% identity) | M.LsiA121ORF460P | |
| 465 | cell division ATP-binding protein FtsE | |||
| 9555 | Uma2 family endonuclease | |||
| 9560 | M | M.Lsp412ORF6565CP (26% identity) | M.LsiA121ORF9560P | |
| 9565 | type II toxin-antitoxin system HicA family | |||
| 14045 | phosphoadenosine phosphosulfate reductase family | |||
| 14050 | M | M.Nsp4103DndEP (80% identity) | M.LsiA121DndEP | |
| 14055 | DNA sulfur modification protein DndD | |||
| 14050 | DNA sulfur modification protein DndE | |||
| 14055 | M | M.Tsp7712DndDP (45% identity) | M.LsiA121DndDP | |
| 14060 | XisI protein | |||
| 14065 | XisH family protein | |||
| 14070 | M | M.Oni7112DndCP (57% identity) | M.LsiA121DndCP | |
| 14075 | 63 aa hypothetical protein | |||
| 15180 | Uma2 family endonuclease | |||
| 15185 | M | M.MaeFD4ORF11655P (49% identity) | M.LsiA121ORF15185P | |
| 15190 | bifunctional phosphoribosyl-AMP | |||
| 16340 | glycosyltransferase | |||
| 16345 | M | M.HcyJJU2ORF16395P (59% identity) | M.LsiA121ORF16345P | |
| 16350 | response regulator transcription factor | |||
| 16885 | DUF1998 domain-containing protein | |||
| 16890 | M | M.Lsp231ORF13640P (89% identity) | M.LsiA121ORF16890P | |
| 16895 | R | Lsp231ORF13640P (47% identity) | LsiA121ORF16890BP | |
| ??? | R | GliD10ORF968P (46% identity) | LsiA121ORF16890AP | |
| 16905 | IS110 family transposase | |||
| 17390 | DUF751 family protein | |||
| 17395 | M | M.KspCCNU1ORF7470P (66% identity) | M.LsiA121ORF17395P | |
| 17400 | 121 aa hypothetical protein | |||
| 18300 | IS982 family transposase | |||
| 18305 | RM | PprC007ORFCP (46% identity) | LsiA121ORF18305P | |
| 18310 | type I restriction endonuclease subunit R | |||
| 19125 | ISKra4 family transposase | |||
| 19130 | R | LspO77ORF3685P (79% identity) | LsiA121ORF19165P | |
| 19135 | IS630 family transposase | |||
| 19140 | site-specific DNA-methyltransferase | |||
| 19145 | transposase | |||
| 19150 | IS630 family transposase | |||
| 19155 | transposase | |||
| 19160 | transposase family protein | |||
| 19165 | M | M.LspO77ORF3685P (78% identity) | M.LsiA121ORF19165P | |
| 19170 | 74 aa hypothetical protein | |||
| 20150 | ATP-dependent zinc metalloprotease FtsH | |||
| 20155 | M | M.Lsp231ORF16975P (63% identity) | M.LsiA121ORF20155P | |
| 20160 | DEAD/DEAH box helicase family protein | |||
| 20805 | FkbM family methyltransferase | |||
| 20810 | M | M.Lsp412ORF14665P (84% identity) | M.LsiA121ORF20810P | |
| 20815 | R | Lsp3755ORF17470P (72% identity) | LsiA121ORF20810P | |
| 20820 | trypsin-like peptidase domain-containing | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 20555 | 341 aa hypothetical protein | |||
| 20560 | R | Lsp174ORF22385P (94% identity) | LsiA121ORF20585P | |
| 20565 | 63 aa hypothetical protein | |||
| 20570 | DUF2283 domain-containing protein | |||
| 20575 | type II toxin-antitoxin system VapC family | |||
| 20580 | type II toxin-antitoxin system | |||
| 20585 | M | M.Lsp174ORF22385P (73% identity) | M.LsiA121ORF20585P | |
| 20590 | DUF2283 domain-containing protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1780 | IS630 family transposase | |||
| 1785 | R | OcyMTP1Mrr2P (98% identity) | LsiA121MrrP | |
| 1790 | 80 aa hypothetical protein | |||