Phytobacter diazotrophicus TA9734 |
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Putative Phytobacter diazotrophicus TA9734 RM systems
Ref: Kubota,H. et al. unpublished
REBASE ref # 33665
| Sequence length: | GenBank #: | |
| Chromosome: | 5,709,362 bp | AP025334 |
| plasmid pTMTA97341: | 174,856 bp | AP025335 |
| plasmid pTMTA97342: | 174,343 bp | AP025336 |
REBASE acronym: Pdi9734
Org_num: 54855
All begin PDTA9734_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 19570 | 397 aa hypothetical protein | |||
| 19580 | M | M.Pdi9832ORF19550P (100% identity) | M.Pdi9734ORF19580P | |
| 19590 | S | S1.Pdi9832ORF19550P (100% identity) | S1.Pdi9734ORF19580P | |
| 19600 | IS5 family transposase | |||
| 19610 | S | S2.Pdi9832ORF19550P (100% identity) | S2.Pdi9734ORF19580P | |
| 19620 | 203 aa hypothetical protein | |||
| 19630 | 594 aa hypothetical protein | |||
| 19640 | R | Pdi9832ORF19550P (100% identity) | Pdi9734ORF19580P | |
| 19650 | metal-dependent hydrolase | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 4070 | cell division protein DamX | |||
| 4080 | M | M.PspSCO41DamP (100% identity) | GATC | M.Pdi9734DamP |
| 4090 | ribulose-phosphate 3-epimerase | |||
| 11280 | LysR family transcriptional regulator | |||
| 11290 | M | M.PspSCO41ORFAP (100% identity) | CCWGG | M.Pdi9734ORF11290P |
| 11300 | 213 aa hypothetical protein | |||
| 11430 | 75 aa hypothetical protein | |||
| 11440 | M | M.Pdi9832ORF11440P (100% identity) | M.Pdi9734ORF11440P | |
| 11450 | replication endonuclease | |||
| 18450 | 86 aa hypothetical protein | |||
| 18460 | M | M.Pdi9832ORF18430P (100% identity) | M.Pdi9734ORF18460P | |
| 18470 | serine protease | |||
| 33310 | 55 aa hypothetical protein | |||
| 33320 | M | M.Pdi9832ORF32950P (100% identity) | M.Pdi9734ORF33320P | |
| 33330 | 86 aa hypothetical protein | |||
| 33330 | 86 aa hypothetical protein | |||
| 33340 | M | M.Pdi9832ORF32970P (100% identity) | M.Pdi9734ORF33340P | |
| 33350 | 162 aa hypothetical protein | |||
| 47360 | TonB-dependent receptor | |||
| 47370 | RM | Pdi9832ORF47000P (100% identity) | Pdi9734ORF47380P | |
| 47380 | M | M.Pdi9832ORF47000P (100% identity) | M.Pdi9734ORF47380P | |
| 47390 | 31 aa hypothetical protein | |||
| plasmid pTMTA97341 | ||||
| 54930 | IS110 family transposase | |||
| 54940 | R | Pdi9832ORF54580P (100% identity) | Pdi9734ORF54950P | |
| 54950 | M | M.Pdi9832ORF54580P (100% identity) | M.Pdi9734ORF54950P | |
| 54960 | methyltransferase | |||
| 54950 | cytosine-specific methyltransferase | |||
| 54960 | M | M.Pdi9832ORF54590P (100% identity) | M.Pdi9734ORF54960P | |
| 54970 | 73 aa hypothetical protein | |||
| plasmid pTMTA97342 | ||||
| 57540 | 100 aa hypothetical protein | |||
| 57550 | M | M.YrupYR1ORFCP (100% identity) | CCNGG | M.Pdi9734ORF57550P |
| 57560 | 143 aa hypothetical protein | |||